CX046272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METAC (30S ribosomal protein S7P OS=Methanosarcina acetivorans GN=rps7p PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.011e-35 Identity = 76/178 (42.70%), Postives = 118/178 (66.29%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK + +R V+ A +I++ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ I+ G +AF++ +++AECLA ELI AA + S++I +KD ERVAKA R Sbjct: 16 VEVKDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.430e-35 Identity = 77/178 (43.26%), Postives = 116/178 (65.17%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK +R V+ A +I+ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ I+ G +AF++ +++AECLA ELI AA + S+AI +KD ERVAKA R Sbjct: 12 VEVRDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKSFAINRKDAKERVAKAAR 185
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.480e-35 Identity = 83/179 (46.37%), Postives = 116/179 (64.80%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 777 V V D SL +I + + +PHTAGR S K F K + +VERL N LM N GKK + I++ A+ I+ T +NPIQV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A I+ GA + A ++ K+IA+CLADEL+ A+K S+A+KKK+E ERVA++ R Sbjct: 20 VTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.642e-35 Identity = 80/179 (44.69%), Postives = 119/179 (66.48%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 777 + V D SL YI ++ +VPHT+GR S + F KA+ IVERL N+LM +N G+K + + IV+ A EII T++NP++V+V+A+ N GPRE+ TRI G+ Q+VD+SP RR++ A+ I G SA +N K+ A+CLADE++ A+K S+A++KK+E ERVA++ R Sbjct: 14 IVVKDPSLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASKADMQRSFAVRKKEEKERVAQSAR 188
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_THEVO (30S ribosomal protein S7P OS=Thermoplasma volcanium GN=rps7p PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.904e-34 Identity = 78/178 (43.82%), Postives = 118/178 (66.29%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V+V+D + YI V++A + HT GR+S K +VERL N LM + GKK A +I K A +II T QNP+Q++++A+ N+GPRE+ TR+ G+ ++VD+SP RRV++A+ I TGA ++F++ K+I CLADE++ AAK ++S+AI KK+EIERVA++ R Sbjct: 11 VEVHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLMRTEKWTGKKYSAYKITKDAFDIIADKTKQNPLQILINAIENAGPREEVTRLKYGGIAVPKSVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMLAAKNDASSFAISKKEEIERVAQSAR 184
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.793e-34 Identity = 74/178 (41.57%), Postives = 119/178 (66.85%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++M + +N GKK +A+RIV A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+ +AVD +P RRV+ A+ I+ G+ ++AF++ ++ AECLA ELI A+ + ++I +KD ERVAKA R Sbjct: 13 VEVADAGIKRYVNLDPV----IVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAASNRDAKCFSINRKDGKERVAKAAR 186
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.450e-34 Identity = 76/178 (42.70%), Postives = 112/178 (62.92%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V + D ++ Y+ + ++ VPH+ GR + + F KA IVERL N LM N GKK +A+RIV+ A EI+H T +NPI+V+ DAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ LI G ++ + K +A LA+ELI AA G Y++ K++E ERVAK+ R Sbjct: 21 VTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANGDVKCYSVAKREERERVAKSAR 194
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.441e-33 Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = -3 Query: 244 DISLSDYIGVQAAKHATYVP--HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 765 DI+ +Y ++ T P HT GR++ K+F+K++ IVERL N LM N GKK +A IV A E++H TD+NPIQV+V AV NS PRE+ R+ G+ +AVD++P RRV+QA+ + G +F+ T AE LA +LI AA +YA+ +K+E ERVA A R Sbjct: 31 DITDIEYSDPSTERYITVTPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAANDDVQTYAVNQKEEKERVAAAAR 206
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_THEAC (30S ribosomal protein S7P OS=Thermoplasma acidophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.882e-33 Identity = 75/178 (42.13%), Postives = 116/178 (65.17%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V+++D + YI V++A + HT GR+S K +VERL N LM + GKK A +I + A +II T QNP+Q++++A+ N+GPRE+ TR+ G+ ++VD+SP RRV++A+ I TGA ++F++ K+I CLADE++ AA+ S+AI KK+EIERVA++ R Sbjct: 11 VEIHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLMRSEKWTGKKYSAYKITEEAFQIIAEKTKQNPLQILINAIENAGPREEVTRLKYGGIAVPKSVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMAAARNDPTSFAISKKEEIERVAQSAR 184
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.193e-33 Identity = 79/165 (47.88%), Postives = 111/165 (67.27%), Query Frame = -3 Query: 244 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 711 +P+T GR ++KRF KA IVERL N MMH GR GKK+ ++ VK A EII+L T +NP++V+V AV NS P ED TRI G V +VD+SPLRRV+ A+ I G +E+AFR K++ E LA+ LI AA ++++ ++KKK+E+ER+A+A+R Sbjct: 36 LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAANNTTDAPSVKKKNELERIAQASR 199 The following BLAST results are available for this feature:
BLAST of CX046272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046272 ID=CX046272; Name=CX046272; organism=Citrus sinensis; type=EST; length=779bpback to top |