CX046272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_PICTO (30S ribosomal protein S7P OS=Picrophilus torridus GN=rps7p PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.477e-33 Identity = 74/178 (41.57%), Postives = 113/178 (63.48%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 +Q++D+ L+ YI + ++ + HT GRYS K +ERL N LM + GKK A R++K A EI+ T QNP+QV+++A+ NS PRE+ TR+ G+ ++VD+SP RR+++A+ I GA +F++ I ECLA+E+I A++ NSYA+ KK+EIERVA + R Sbjct: 14 IQIHDMGLAKYINL----NSYFNLHTGGRYSNYSAGKRNVNTIERLLNKLMRTEKWTGKKYSAYRVLKEAFEIVEQKTKQNPVQVLINAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNICIGATSKSFKSKVPIEECLANEIILASRNDGNSYAVSKKEEIERVAASAR 187
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_KORCO (30S ribosomal protein S7P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps7p PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.477e-33 Identity = 83/170 (48.82%), Postives = 111/170 (65.29%), Query Frame = -3 Query: 244 YVPHTAGRYSVKRFRKAQCPIVERLTNSLM------------MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSN-SYAIKKKDEIERVAKANR 714 Y+PHT GR+ K+F K + PIVERL N LM ++ +N GKKL A+R VK+A EII L T +NPIQV +DA+ NS RE+ TRI GV AVD SP R V+ AI I GA AFR+ +++AE LA+E+I AA+ N S+AI++K+EIER+A ++R Sbjct: 39 YLPHTGGRHEHKKFGKLEIPIVERLVNRLMGQAMNSGSRKDHVNSKNQGKKLKAMRTVKYAFEIIELRTGKNPIQVFLDAIENSIIREEVTRIMYGGVSYFHAVDTSPSRMVDLAIRHIAQGAAMKAFRSPRSLAEALAEEIIAAAEYDRNRSFAIRRKEEIERIALSSR 208
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.342e-33 Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 + D S Y+ V T V HT GR++ K+F+K++ IVERL N LM G N GKK A++IV+ A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+ QAVD +P RRV+QA+ + GA ++F+ AE LA++L AA + +YAI +K E ERVA A R Sbjct: 39 IHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKERVAAAAR 210
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METB6 (30S ribosomal protein S7P OS=Methanoregula boonei (strain 6A8) GN=rps7p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.033e-31 Identity = 75/178 (42.13%), Postives = 113/178 (63.48%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V+V D SL Y+ + +PH+ G++S + F KA IVERL N LM N GKK +A+ IV+ A E+I+ T +NPI+V+V+A+ N+GPRE+ R+ G+ ++VD +PLRRV+ AI I +S+ ++ K + LADELI A+KG + Y++ KK+E ER+AK+ R Sbjct: 31 VKVTDPSLVRYVNLTPQ----IIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_THEON (30S ribosomal protein S7P OS=Thermococcus onnurineus (strain NA1) GN=rps7p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31 Identity = 82/194 (42.27%), Postives = 111/194 (57.22%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ GKK+ A +VK A II T QNPIQV + A+ NS PRED T I G+ AVD+SPLRR++ A+ I GA +RN + A+ LA+E+I AA S+A KK+EIER+A+++R Sbjct: 26 VVVNDPSLRPYINLEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASSHKVGGHFMRREHRSLMGKKMKAYEVVKEAFMIIERRTKQNPIQVFIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANKDPKSFAYSKKEEIERIAQSSR 215
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31 Identity = 82/194 (42.27%), Postives = 111/194 (57.22%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ KK+ A +VK A II T QNPIQV++ A+ NS PRED T I G+ AVD+SPLRR++ A+ I GA +RN T A+ LA+E+I AA S+A KK+EIER+A+++R Sbjct: 26 VTVNDPSLRPYIALEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDVALKNIALGASIKCYRNKTTYAQALAEEIIAAANRDPKSFAYSKKEEIERIAQSSR 215
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_PYRKO (30S ribosomal protein S7P OS=Pyrococcus kodakaraensis GN=rps7p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.925e-31 Identity = 82/194 (42.27%), Postives = 109/194 (56.19%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V V D SL YI + A +PH+ GRY+ K F KA IVERL N +M G ++ KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ +VD+SPLRR++ A+ I GA +RN T A+ LA+E+I AA S+A KK+EIER+A+++R Sbjct: 26 VTVEDPSLKPYINLDAR----ILPHSHGRYAKKPFGKANVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVKAIENSAPREDTTTIAFGGIRYHMSVDVSPLRRLDIALKNIALGASIKCYRNKTTYAQALAEEIIAAANKDPKSFAYSKKEEIERIAQSSR 215
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_NATPD (30S ribosomal protein S7P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps7p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.925e-31 Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 ++ +D S YI V T + HT GR+S K+F+K++ IVERL N LM N GKK A +IV+ A +I+ TD+NP+QV+V AV N+GPRE+ R+ G+ +AVD++P RRV+ A+ I G +F+ + E LA +LI AA +Y + +K+E ERVA A R Sbjct: 32 IEYDDPSTRRYITV------TPIAHTMGRHSEKQFKKSEISIVERLINRLMQTDENTGKKQQATKIVREAFDIVAERTDENPVQVLVTAVENAGPREETVRLKYGGISVPKAVDVAPQRRVDLALKFIAEGTYNDSFKTTTPVEEALAHQLIGAANYDLQAYPVSQKEEQERVAAAAR 203
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_METLZ (30S ribosomal protein S7P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps7p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.126e-31 Identity = 72/178 (40.45%), Postives = 110/178 (61.80%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V V D + Y+ + + T VP + GR + ++F K++ IVERL N LM N GKK+M ++V A ++I+ T QNP+QV+VDAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ I + + + K LADELI AAKG + +++ KK+E+ER+AK+ R Sbjct: 21 VVVKDAGMVRYVTITS----TEVPSSCGRLTQQQFTKSEMAIVERLINRLMQQEYNTGKKMMCTKMVMDAFDVINKKTKQNPLQVLVDAVANAGPREETVRLKYGGINVPKSVDSAPIRRVNTALRYIALATWKGSHKTKKPAYLVLADELIMAAKGDAKCFSVGKKEEVERIAKSAR 194
BLAST of CX046272 vs. ExPASy Swiss-Prot
Match: RS7_THECE (30S ribosomal protein S7P OS=Thermococcus celer GN=rps7p PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.695e-31 Identity = 80/194 (41.24%), Postives = 110/194 (56.70%), Query Frame = -3 Query: 244 VQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 777 V VND SL YI ++A +PH+ GR++ K F KA IVERL N +M G + KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ AVD+SPLRR++ A+ I GA +RN + A+ LA+E+I AA ++A +K+EIER+A+++R Sbjct: 26 VTVNDPSLRPYINLEAR----LLPHSHGRHAKKAFGKANVHIVERLINKVMRSGATSHKAGGHFMRRDDRSLMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANADPKTFAYSRKEEIERIAQSSR 215 The following BLAST results are available for this feature:
BLAST of CX046272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046272 ID=CX046272; Name=CX046272; organism=Citrus sinensis; type=EST; length=779bpback to top |