CX046242

Overview
NameCX046242
Unique NameCX046242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046242 vs. ExPASy Swiss-Prot
Match: API2_SOLTU (Aspartic protease inhibitor 2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 63/202 (31.19%), Postives = 99/202 (49.01%), Query Frame = -2
Query:  235 QPLLGISSNS---EPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSSKDGVRRLALVGDDEPALNVLF 798
            Q L+ + S S   +PV D  G ++     Y++I +  GA G   +LG    ++G CP  V + +S     G  +R +P      +     +N++F +  +VK C    +WKV +    +   L+ TGG  G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRLALV  +E  L+VLF
Sbjct:   25 QNLIDLPSESPLPKPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDGPCPDGVFRYNSDVGPSGTFVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
BLAST of CX046242 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = -2
Query:  259 LGISSNSEPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTD--VNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSSKDGVRRLALVGDD 789
            + + S++ PV D+ G ++   L Y++I +  GA G   +LG    ++  C   V + +S     G  +R +   ++    +     +N++F +  +VK C    +WKV  YD  L    + TGG  G   +    +WFKI K+    Y    N+++CP    S  + C K+GV  ++G RRLALV D+
Sbjct:   27 INLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDIS-TVKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGY----NLLYCPFS--SDDQFCLKVGVVHQNGKRRLALVKDN 203          
BLAST of CX046242 vs. ExPASy Swiss-Prot
Match: API8_SOLTU (Aspartic protease inhibitor 8 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 61/202 (30.20%), Postives = 94/202 (46.53%), Query Frame = -2
Query:  235 QPLLGISSNS---EPVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSSKDGVRRLALVGDDEPALNVLF 798
            Q L+ + S S   +PV D  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P           ++    P   +VK C    +WKV +    +   L+ TGG  G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRLALV  +E  L+VLF
Sbjct:   25 QNLIDLPSESPLPKPVLDTNGKELNPDSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
The following BLAST results are available for this feature:
BLAST of CX046242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
API2_SOLTU1.823e-1131.19Aspartic protease inhibitor 2 OS=Solanum tuberosum... [more]
SPI5_SOLTU4.061e-1129.26Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
API8_SOLTU6.927e-1130.20Aspartic protease inhibitor 8 OS=Solanum tuberosum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_6F12_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-6F12-L24-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046242 ID=CX046242; Name=CX046242; organism=Citrus sinensis; type=EST; length=859bp
TTTTTTTTTTTTTTTTTACATAACATGAGTAGAGATTAACAACAGCAAAA
GGATCACAGGCGGTGTTATTTTTATTCTGTAATAGAGATAAAAGGTTACT
AGCCTGGTCTATTATTTAGAATGATACAGCTAGTTCATTCATTACGCGGC
CATTGATATTGCTTCAGCAGCTTCAAAAAACCTTGATATTGCGTTAGCAG
CTTGAAGTAGCCTTGATCTTTCCTCTGATGGAAAAAACAGAACATTCAAA
GCCGGTTCATCATCACCAACTAGAGCCAGACGTCGAACGCCATCCTTAGA
AGAAACGCCAATTTTGTTGCAGCGTCTAGGACAAGAAAGACAGACACTCG
GACAATGGACAATATTGTATACACCACCATATGAAAAATTTCCAGCTTTC
TCAATCTTAAACCAATTTAGCAACGTTTCAGCTCCTGGGTGGCCCTCAAT
TCCGCCGGTTACAATTAATGGATCGTCATAGCTATCAACTTTCCACAATG
GTTCTTCATTACAGGGCTTAACAGAAACTTTTACGGGGAATCTCAGGTTG
ACATCAGTGGATACCTTGACAATTTTGTAATTGTCGTACGGAAGTAATCT
TAAATTATCTCCCCTTTCGCTAGGAGAACTTAATTGGATAACGTCCAAGG
GACACTGTCCATTTGTGCCTAGGTGTGTGCTGAATCCACCGGCGCCATCT
AGGACTGGGATAAGTTTATACTCGAGGGTGGATTTGACCTTGTTGCCAAT
GATATCAAAGACAGGTTCAGAGTTTGATGAGATGCCCAATAGAGGCTGCG
TGGCCAAGGTAAGGATAAGGAAGGAGAGTGTTGTTATCAATGAAGTCTTC
ATTTTTTTG
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