DN618095

Overview
NameDN618095
Unique NameDN618095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN618095 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = -3 
Query:  423 PNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 623
            P+L S+R LI KRG        + +   I L DN+I+E+ LG  GIIC+ED+IHEI T+G  F   N FL PF
Sbjct:  199 PSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271
[Close]
BLAST of DN618095 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = -3 
Query:  423 PNLKSVRELIYKRG---YGKLDKQR---IALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 623
            P+LKS+R LI KR    Y + D++    I L DN+I+E+ LG  G+IC++D+IHEI T+G +F + N FL PF
Sbjct:  194 PSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266
The following BLAST results are available for this feature:
BLAST of DN618095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
RLP7_YEAST3.978e-1147.95Ribosome biogenesis protein RLP7 OS=Saccharomyces ... [more]
RLP7_CANGA3.978e-1147.95Ribosome biogenesis protein RLP7 OS=Candida glabra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02B16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618095 ID=DN618095; Name=DN618095; organism=Citrus sinensis; type=EST; length=628bp
CCCCCTTTTTTTTTTTTTTGCGTTACAAAATAGCACAATATTATATGCAA
TCATGAGGCCTTCATGCTTTTGAAAATCTGGACATACATAAAAAATTATG
AACTAACCCTCGAATCCGAAGCAGAATAAAATTTCCAAATAACATCTCAT
GATCCATTGTTTAAAACAAAAACTGTTTCCACATTCAAAGGGGGAACTAA
AATTTTGATTGCTTCGGTACCAACAATATCTTAGCATAAGAACCTCAAAA
CTCTTAAATAATGAAACACCTCAAAACTCTAAATAATCATCAAAATAATG
CGAACTGCCTAGTTCATTCTTCTGATCAGCTCATTGATGTAGTTCTCACG
GTTTCCAGCATCACCACCCTCGACATAGTGGTTCCTCTTCTTCTTCAGGC
CACCCAATGGTGCCTTAAGCTTAAATGGCCATAAAAAGTTGTTAGCCTCC
TTAAAATGAGGTCCCACTGTCATAATCTCATGGATCAGGTCTTCCATGCA
GATGATACCGAACTTGCCCAAAGCCTTCTCAATAATCGAGTTATCAGTCA
AAGCAATTCTCTGCTTATCTAGCTTTCCATATCCCCTCTTGTAAATGAGC
TCCCTAACACTCTTCAAATTGGGGTATC
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