CX046166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 191 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA 577 KR+ +EL L SA P ++++F W TI G + + Y + +++ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K+ A Sbjct: 33 KRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.176e-21 Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 182 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 616 +A R+ +E K +KD P A P ++ +W+ I G +P+ GG+F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI+++ + I LL +PN +P E +Y ++ +YE R+ +K+ Sbjct: 4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKRFRAQAKKF 155
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC22_ARATH (Ubiquitin carrier protein E2 22 OS=Arabidopsis thaliana GN=UBC22 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 191 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 619 K++ KELK L + PP ED A I GP +PY G+F + + D+P PPK F TK+FHPN+ SNG IC++ LK+ W+P+L + VL + LL +P P+ L + M + +Y AR +T +A Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHA 155
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 565 + K ++ ELK LQ++P V E D+++W+ I GP ++ Y GG F I FP DYP+ PP F TK++HPNI NG +C+ IL E+W+P + +LLS+ SLL +PN P + + M++ Sbjct: 9 SQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFR 149
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 565 + K ++ ELK LQ++P V E D+++W+ I GP ++ Y GG F I FP DYP+ PP F TK++HPNI NG +C+ IL E+W+P + +LLS+ SLL +PN P + + M++ Sbjct: 9 SQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFR 149
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 565 + K ++ ELK LQ++P V E D+++W+ I GP ++ Y GG F I FP DYP+ PP F TK++HPNI NG +C+ IL E+W+P + +LLS+ SLL +PN P + + M++ Sbjct: 9 SQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFR 149
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 574 + K +L ELK LQ++P V E D+++W+ I GP ++ Y GG F + FP DYP+ PP F TK++HPNI G +C+ IL E+W+P + +LLS+ SLL +PN P + + MY+ K Sbjct: 9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWK 152
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21 Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 574 + K +L ELK LQ++P V E D+++W+ I GP ++ Y GG F + FP DYP+ PP F TK++HPNI G +C+ IL E+W+P + +LLS+ SLL +PN P + + MY+ K Sbjct: 9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWK 152
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 191 KRILKELKDLQKDP---PTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 619 +RI E + D S V E++F W+ I GP +S Y F + I DYP+ PKV F T + H N+N G ICL+ILK+ W+ +L I ++ SI LL PNP+DP E+A +Y++DK Y+ R + + ++ Sbjct: 7 RRIQNEYNKINNDKNLYADSFQINMVDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHS 153
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20 Identity = 51/152 (33.55%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 182 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 616 ++S R+ +E K+ ++D P A P +++ W I G + + + GGV+ + + F DYP KPPK F FHPN+ +G++CL IL E+ W P++TI VLL I LL +PNP P H++ ++K +Y+ ++ ++ Y Sbjct: 4 ISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVY 155 The following BLAST results are available for this feature:
BLAST of CX046166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046166 ID=CX046166; Name=CX046166; organism=Citrus sinensis; type=EST; length=843bpback to top |