CX046166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.940e-18 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 2 Query: 296 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 619 GP +PY GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP DPL + A MY +Y+ + + QKYA Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.940e-18 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 2 Query: 296 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 619 GP +PY GGV+ V + P YPFK P + F K+FHPNI+ ++G++CLD++ + W+ ++ + S + LL PNP DPL + A MY +Y+ + + QKYA Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.533e-18 Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 185 ASKRILKELKDLQKD-PPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 622 ASKR+ KEL DL K+ PP ++ W ++ P PY F + I FP +YP KPP + F TK++HPNI+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + D + A +T +Y + Sbjct: 3 ASKRVAKELDDLSKELPPYLRHLSSDDANVLVWHMLLL-PDQLPYRLKAFGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQDPEMFRKKAEEFTLQYGV 149
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18 Identity = 55/176 (31.25%), Postives = 85/176 (48.30%), Query Frame = 2 Query: 191 KRILKELKDLQKDPPTSCSA---------GPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT----------------------KVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-SDKAKYESTARSWTQKYA 619 KR+LKE + ++K+ S P+ + +F W A I GP SP+ ++ + I P +YP PPK+ F K+ HPN+N G ICLDIL+++WSPA T+ L++I LL +P P PL ++A++ K D Y+ + KY+ Sbjct: 6 KRLLKEYRAVKKELTEKRSPIHDTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYYIAKYS 181
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18 Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 598 A RI K++ +L P +C +D+ +++ I P + Y GG F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + ++++ +E + Sbjct: 30 AQLRIQKDINELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18 Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 176 RVMASKRIL-KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 619 RV R+L KE+ +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK +Y + + ++YA Sbjct: 29 RVSVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18 Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 598 A RI K++ +L P +C +D+ +++ I P + Y GG F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + ++++ +E + Sbjct: 30 AQLRIQKDITELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18 Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 176 RVMASKRIL-KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 619 R+ R+L KE+ +L+ + P +C + H+ + P +S Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK +Y + + ++YA Sbjct: 29 RISVRDRLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYA 184
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 598 A RI K++ +L P T + +D+ +++ I P + Y G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + ++++ +E + Sbjct: 30 AQLRIQKDINELNL-PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of CX046166 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 2 Query: 185 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 598 A RI K++ +L P T + +D+ +++ I P + Y G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + ++++ +E + Sbjct: 30 AQLRIQKDINELNL-PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165 The following BLAST results are available for this feature:
BLAST of CX046166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046166 ID=CX046166; Name=CX046166; organism=Citrus sinensis; type=EST; length=843bpback to top |