DN618039

Overview
NameDN618039
Unique NameDN618039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = -2
Query:  200 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 571
            V G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  ++ G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L +
Sbjct:  136 VAGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 45/124 (36.29%), Postives = 63/124 (50.81%), Query Frame = -2
Query:  200 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 571
            +GG+V NW  V M       +DP  M     V + GHD    A   + ++  G    V G   +    AE  I+  T+EV PG+ VTGM    + G  RMGP FG M++SG++AA L  + LG+
Sbjct:  138 IGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHD----AMIARMVEKKGGALTVKGESFMWAERAESQILAHTKEVFPGLFVTGMAANAVAGECRMGPIFGGMLLSGERAAELVAERLGR 254          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  206 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 511
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ L
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKL 259          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12
Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = -2
Query:  206 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE-EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 571
            V G+V NW  V+     +  +DP ++  K+V+   GH+     T ++++ +  + E  + G K +     E   V  T+E+ PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct:  138 VTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLLGEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12
Identity = 40/122 (32.79%), Postives = 65/122 (53.28%), Query Frame = -2
Query:  206 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 571
            V G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  +V G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L
Sbjct:  136 VTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.622e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  206 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 511
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.622e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  206 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 511
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.425e-12
Identity = 41/126 (32.54%), Postives = 67/126 (53.17%), Query Frame = -2
Query:  206 KAAEVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 583
            K  +V GVV N   ++        +DP  + AK V+ + GHD     T  ++ + +G++  +PG K+L  +  E+ +++ T+E+ PG+ V GM      G  RMG  FG M ISG+  A + L+ L
Sbjct:  140 KEGKVSGVVINSYAINK---AGLHIDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  206 VGGVVTNWA-LVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE---EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 571
            V GVV NW   V +       +DP  ++A  VV   GH     A  V  L   G++E   E P    +D + AE  +V  T E+ PG++V+GM V  + G PRMGP FG M++SGQK A +  + L
Sbjct:  136 VCGVVVNWGPTVRLGLH----VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP----MDADEAEKFVVDNTGEIFPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249          
BLAST of DN618039 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = -2
Query:  206 VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL-KSIGMIEEVP-----GMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 571
            + G+V NW+ V M       +DP  + A+ V+ + GHD       VK + + IG     P     G +++  +  E A++  TREV P + V GM    + GAPRMGP FG M++SG++ A + ++ L
Sbjct:  137 ITGLVLNWSSVEM---AGLHVDPLTVRARAVIDATGHDCEI----VKVVERKIGPELNTPDGRIQGERSMWADVGEAALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 257          
The following BLAST results are available for this feature:
BLAST of DN618039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
THI4_PYRCJ9.013e-1331.45Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_METMJ9.013e-1336.29Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_METM71.537e-1238.24Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METAC1.537e-1235.77Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_PYRAE2.008e-1232.79Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_METM62.622e-1237.25Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM52.622e-1237.25Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_META33.425e-1232.54Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_THEMA4.473e-1238.10Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_METTH4.945e-1133.59Putative thiazole biosynthetic enzyme OS=Methanoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618039 ID=DN618039; Name=DN618039; organism=Citrus sinensis; type=EST; length=608bp
ATTATTGCGCATCAACCATCCATCACAACCACCTAAATACAACTACTTTT
TTGCCAGAGTTTATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTT
ATTATCAAATTAACCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGA
TCAGCTCAGGGTGAACACCTCCCACATATGTACCGTCTAATGCATTCGGC
TGGCCCAGTGACTTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCAT
CATTGCTCCAAATGTTGGCCCCATTCTAGGAGCACCATCAATCTCGGCAA
CTTCCATGCCGGTAACTATCATACCAGGCACAACCTCCCTGGTCAGCCTC
ACAATAGCATCTTCTGCAGAGTTCATGTCCAGTGCCTTCATTCCAGGCAC
TTCCTCAATCATTCCGATACTCTTCAACCTCTTTACTCCAGTGGCCCCAA
AAGGCCCATCATGGCCACAAGAGCTCACAACCACCTTCGCTTCCATTACA
TTGGGATCCATGCAAGACTGTGTATCGTGATTCATTGACACCAACGCCCA
GTTGGTCACCACACCACCAACTTCTGCCGCCTTTGACTATCAAGTCCTCG
GCTGCCAC
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