FC921929

Overview
NameFC921929
Unique NameFC921929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length267
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 3
Query:   24 KFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE---PVDMGEALGLSIQKARPL 263
            +F+PER L  +  +D RGQ+ EL+PFG+GRR CP +SFA+ + E  LA L+  FD+  P        D+ E+ G+++ +  PL
Sbjct:  403 EFRPERHLNSY--VDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHRMFPL 483          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:   24 KFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            KF+PER L     +D RG NFEL+PFG+GRR CP +SFA+ ++E  LA  +  +D+  P +      ++ E+ G+ I +  PL
Sbjct:  402 KFRPERHLD--SSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKENQTNVAESTGMVIHRLFPL 482          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE-PVDMGEALG 236
            W++P +F+PERF      ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+Q F+   P  +  +D  E  G
Sbjct:  411 WKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 487          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 28/77 (36.36%), Postives = 45/77 (58.44%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE-PVDMGEALG 236
            W++P  F+PERFL     ++  G +F  +PFG GRR+CPG+  AL ++  T+  ++Q F+   P  +  +D  E  G
Sbjct:  410 WKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNF---ELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPL 263
            +WEEP KF P+R+       D  G ++   +L+PFG+GRR CPG     +++   L +L+Q F++     E +DM E+ GL ++K  PL
Sbjct:  403 IWEEPEKFNPDRYN------DGCGSDYYVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTGLGMRKMDPL 485          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            W +  +F PERF      ID +G +FE +PFG+GRR CPG++F L  +   LA LL  F++  P+    E +DM E  G+++ +   L
Sbjct:  409 WSDADRFIPERF--NDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKL 494          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN-EPVDMGEALGLSIQKAR 257
            W++   F+PERF      ID  G NFE LPFG GRR CPG+SF L  +   LA LL  FD+  P+  EP D+       I  AR
Sbjct:  406 WDDAESFKPERF--EQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAAR 487          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11
Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP 200
            WE   +F PERF+  +  +D +GQ+F+L+PFG+GRR CPG++F +  +E +LA LL  F++  P
Sbjct:  408 WENAEEFLPERFV--NNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 28/77 (36.36%), Postives = 45/77 (58.44%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE-PVDMGEALG 236
            W +P +F+PERFL     ++  G +F+ +PFG GRR+CPG+  AL ++   +  L+Q F+   P  +  +D  E  G
Sbjct:  411 WNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGG 487          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 3
Query:   18 PCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            P +F+PERFL   K++D +G ++E +PFGSGRR CPG+     ++E   A LL  F+F  P+    + ++M    GL++ K++ L+
Sbjct:  410 PDEFRPERFL--EKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLK 493          
The following BLAST results are available for this feature:
BLAST of FC921929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71AO_ARATH1.989e-1140.96Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.989e-1140.96Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN2.598e-1138.96Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_RUTGR2.598e-1136.36Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C81F1_ARATH2.598e-1137.08Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN2.598e-1138.64Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71D7_SOLCH2.598e-1145.24Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71A1_PERAE2.598e-1145.31Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
TCMO_PETCR3.393e-1136.36Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C83A1_ARATH3.393e-1138.37Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC06054A10T7 RindPdigS Citrus sinensis cDNA clone C06054A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921929 ID=FC921929; Name=FC921929; organism=Citrus sinensis; type=EST; length=267bp
ACGNTGTCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACA
AGGCACAAGGATATTGATGTCAGAGGACAAAATTTTGAATTGTTACCTTT
TGGTAGTGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTA
TGGAATTTACACTTGCTGCTTTACTTCAAGGCTTTGATTTTGCAACCCCA
TCAAATGAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAA
AGCTAGACCACTTGAAG
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