FC921929

Overview
NameFC921929
Unique NameFC921929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length267
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.331e-15
Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPL 263
            +WE P +F+PERF+     +++DVRG +  L PFG+GRR CPG +  L  +   +A LL  F++   +  PVD+ E L LS + ARPL
Sbjct:  451 IWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPL 538          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.738e-15
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTR-HKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE-PVDMGEALGLSIQKARPL 263
            +WE P +F P+RFL R +  ID RG +FEL+PFG+GRR C G    + ++E+ L  L+  FD+  PS+   ++M E  GL++QKA PL
Sbjct:  408 LWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVIELNMDEPFGLALQKAVPL 495          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.270e-15
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPS---NEPVDMGEALGLSIQKARPL 263
            W++P KFQPERFL    DI+  G+ F+ +PFGSGRR CPG   A++++   LA+L+  F +  P    NE +DM E   LS+  A+PL
Sbjct:  394 WKDPLKFQPERFLD--SDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPL 479          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.965e-15
Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKD-IDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDF-ATPSNEPVDMGEALGLSIQKARPL 263
            WE+P +F+PERF+   ++ +DVRGQ++  +PFGSGRR CPG S A QV+   LA ++Q F +     N  VDM E  G+++ +A P+
Sbjct:  409 WEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGITLPRANPI 495          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.965e-15
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLT-RHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN-EPVDMGEALGLSIQKARPL 263
            VWE P  F PERFL+ +H  ID RG +FEL+PFG+GRR C G       +E+ L  L+  FD+  P     V+M E+ G+++QK  PL
Sbjct:  421 VWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVVEVNMEESFGIALQKKVPL 508          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.965e-15
Identity = 42/90 (46.67%), Postives = 56/90 (62.22%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            VW++P  F PERF+  H +ID +G +FELLPFGSGRR CPG+   + ++  TL  LL  FD+  P     E VD+ E+ GL   K  PL+
Sbjct:  400 VWKDPEVFIPERFM--HSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPLQ 487          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.965e-15
Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            VW++P  F PERF+     ID +G NFELLPFGSGRR CPG+   + ++  TL  LL  FD+  P     E VD+ E+ GL   K  PLE
Sbjct:  400 VWKDPEAFIPERFMDNQ--IDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLE 487          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.965e-15
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQKARPLE 266
            W +P +F PERF   +  +D RGQ+F+LLPFGSGRR CPG+  A+  +E  L  LL  FD++ P     E +DM EA  +SI K  PL+
Sbjct:  409 WNDPEEFNPERFA--NSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQ 495          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.873e-15
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            W++P +F PERF+  + +ID +GQNFELLPFGSGRR CP +     ++EF LA LL  FD+  P     E +DM E+ GL+  K   L
Sbjct:  405 WKDPEEFLPERFV--NSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGLNASKKNEL 490          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.873e-15
Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            +W++P +F PERF+    DIDV+GQ++ELLPFGSGRR CP V   +  +EF LA LL  FD+  P     E + M EA GL+  K   L
Sbjct:  407 IWKDPEEFLPERFMDC--DIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDL 493          
The following BLAST results are available for this feature:
BLAST of FC921929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C78A4_PINRA1.331e-1543.18Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C75A5_EUSGR1.738e-1545.45Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C80A1_BERST2.270e-1545.45Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C93A1_SOYBN2.965e-1544.83Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C75A6_CAMME2.965e-1545.45Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71BE_ARATH2.965e-1546.67Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH2.965e-1547.78Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH2.965e-1547.19Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH3.873e-1547.73Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH3.873e-1548.31Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06054A10T7 RindPdigS Citrus sinensis cDNA clone C06054A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921929 ID=FC921929; Name=FC921929; organism=Citrus sinensis; type=EST; length=267bp
ACGNTGTCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACA
AGGCACAAGGATATTGATGTCAGAGGACAAAATTTTGAATTGTTACCTTT
TGGTAGTGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTA
TGGAATTTACACTTGCTGCTTTACTTCAAGGCTTTGATTTTGCAACCCCA
TCAAATGAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAA
AGCTAGACCACTTGAAG
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