FC921929

Overview
NameFC921929
Unique NameFC921929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length267
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2429 contig Csv1_Contig2429:92..358. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.539e-14
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            W++P  F PERF+  +  ID +GQ+FELLPFG GRR CP +     ++EF LA LL  FD+  P     + +D+ EA GL++ K   L
Sbjct:  404 WKDPEVFLPERFMDNN--IDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNEL 489          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.539e-14
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDM-----GEALGL 239
            +W  P +F P+RFL     ID +G NFELLPFGSGRR CPG++  + ++EF L  LL  FD+  P  E  D      G A+GL
Sbjct:  404 LWTNPDEFNPDRFLD--SSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEKEEADKIITGNGVAVGL 484          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVD---MGEALGLSIQKARPL 263
            W +P  F PERFL  +  +D RG +F L+PFG+GRR CPG+  A Q +   +A  +Q  D+  P+   VD   + E  GL++QK  PL
Sbjct:  394 WTDPLTFSPERFL--NSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPL 479          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPL 263
            W++P +F PERF+  +  ID +GQ+FELLPFGSGRR CP +     ++EF LA +L  FD+  P     E +D+ E+ GL+  K   L
Sbjct:  405 WKDPEEFLPERFV--NSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKNEL 490          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQK 251
            W EP KF P+RFL     +D +G +FE LPFG GRR CPG++FAL  +E  LA LL  FD+ + + E ++M E+ G+++++
Sbjct:  401 WIEPEKFNPDRFL--ESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQS-NTEKLNMKESRGVTVRR 478          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQKARPLE 266
            +W  P +F PERF+  +  +D RGQ+FELLPFGSGRR CPG+   + ++E  L  LL  FD+  P   +++ +D  EA  L++ K  PL+
Sbjct:  408 LWINPEEFNPERFI--NNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEEAGILTVVKKVPLK 495          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 3
Query:   24 KFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPL 263
            +F+PER L    D   RGQ+FEL+PFG+GRR CPG+SFA+ + E  LA L+ GFD+ +  +E  D+ E++G  I++  PL
Sbjct:  399 EFRPERHLESPSDF--RGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDE-TDVAESIGSVIRRMHPL 475          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.125e-13
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVD---MGEALGLSIQKARPL 263
            W +P  F PERFL  +  +D RG +F L+PFG+GRR CPG+  A Q +   +A  +Q  D+  P+   VD   + E  GL++QK  PL
Sbjct:  395 WIDPLTFSPERFL--NSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPL 480          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.125e-13
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            W  P +F PERFL  +  I+ +GQ++ELLPFG+GRR CPG++  + ++E  L  +L  FD++ PS    + +DM E   L+I K  PL+
Sbjct:  406 WTNPEEFNPERFL--NTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQ 492          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.775e-13
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            WE P  F PERF+     ++ +GQ++ELLPFG+GRR CPG++  + ++E  L  +L  FD++ P     E +DM EA    + K  PLE
Sbjct:  406 WENPNDFNPERFID--SPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLE 492          
The following BLAST results are available for this feature:
BLAST of FC921929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71BW_ARATH9.539e-1444.32Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH9.539e-1446.99Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA1.246e-1342.05(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BX_ARATH1.246e-1344.32Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.627e-1345.68Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BG_ARATH1.627e-1343.33Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.627e-1347.50Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C80B2_ESCCA2.125e-1342.05(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71BU_ARATH2.125e-1342.70Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH2.775e-1341.57Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06054A10T7 RindPdigS Citrus sinensis cDNA clone C06054A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921929 ID=FC921929; Name=FC921929; organism=Citrus sinensis; type=EST; length=267bp
ACGNTGTCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACA
AGGCACAAGGATATTGATGTCAGAGGACAAAATTTTGAATTGTTACCTTT
TGGTAGTGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTA
TGGAATTTACACTTGCTGCTTTACTTCAAGGCTTTGATTTTGCAACCCCA
TCAAATGAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAA
AGCTAGACCACTTGAAG
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