FC921929

Overview
NameFC921929
Unique NameFC921929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length267
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.775e-13
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQK 251
            +W +P +F+PERF+     +D RGQ+FELLPFGSGRR CPG++  +  +E  L  LL  FD+  P   S++ +D  EA  L++ K
Sbjct:  408 LWTDPEEFKPERFID--SPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVK 490          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.625e-13
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDID--VRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNEPVDMGEALGLSIQKARPL 263
            VW++P +F PERF+T   D +  + G +  L PFGSGRRACPG +     + F +A+LL  F++     + VD+ E L LS + A PL
Sbjct:  427 VWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.625e-13
Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDV--RGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP-SNEPVDMGEALGLSIQKARPL 263
            WE+P +F PERF+     +DV  +G++   +PFGSGRR CPG++F    ME  LA L+  FD+  P S   V M E+ GL++++   L
Sbjct:  441 WEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTLRRKEKL 528          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.625e-13
Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQKARPLE 266
            +W  P +F PERF+     +D RGQ++ELLPFGSGRR CPG+   +  +E  L  LL  FD+  P   +++ +D  EA  L+I K  PL+
Sbjct:  408 LWTNPEEFDPERFMD--SSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLQ 495          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.625e-13
Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            W  P +F PERF   +  I+ +GQ++ELLPFG+GRR+CPG++  + ++E  L  +L  FD++ P+    + +DM E   L+I K  PLE
Sbjct:  408 WTNPEEFNPERFA--NTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLE 494          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.734e-13
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTR--HKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE-----PVDMGEALGLSIQK 251
            VWE+P +F PERF+     K     GQ+F  LPFGSGRR CPG +F L  ME  LA L+  FD+  P+ +      V M E  GL +++
Sbjct:  435 VWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRR 523          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.734e-13
Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDF-ATPSNEPVDMGEALGLSIQKARPLE 266
            +WE P +F PERF+     +D +G +FE+LPFGSGR+ CPG++F +  +E  L  LL  FD+     ++ +DM EA   +I K  PLE
Sbjct:  409 LWENPEEFNPERFIDC--PMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPLE 494          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.183e-13
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            +WE P +F+PERF+     +D RG NFELLPFGSGRR CPG++  +  +E  L  LL  FD+  P     + +D+ E   + I K   LE
Sbjct:  407 LWENPEEFKPERFVD--SSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLE 494          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.183e-13
Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQKARPLE 266
            +W  P +F PERF+     +D RGQ++ELLPFGSGRR CPG+   +  +E  L  LL  FD+  P   +++ +D  EA  L+I K  PL+
Sbjct:  408 LWTNPKEFDPERFMDSF--VDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLK 495          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.075e-13
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRG-QNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFD-FATPSNEPVDMGEALGLSIQKARPL 263
            VW +P KF P+RFL+  +D D+ G +  +++PFG GRR CPG+  A   +   LA ++Q F+ FA P N  VD  E L  ++    PL
Sbjct:  404 VWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPL 491          
The following BLAST results are available for this feature:
BLAST of FC921929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71BH_ARATH2.775e-1344.71Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C78A3_SOYBN3.625e-1342.05Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71C2_MAIZE3.625e-1342.05Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71BK_ARATH3.625e-1343.33Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH3.625e-1341.57Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE4.734e-1343.82Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71B3_ARATH4.734e-1343.18Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BN_ARATH6.183e-1343.33Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH6.183e-1343.33Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C77A1_SOLME8.075e-1340.91Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC06054A10T7 RindPdigS Citrus sinensis cDNA clone C06054A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921929 ID=FC921929; Name=FC921929; organism=Citrus sinensis; type=EST; length=267bp
ACGNTGTCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACA
AGGCACAAGGATATTGATGTCAGAGGACAAAATTTTGAATTGTTACCTTT
TGGTAGTGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTA
TGGAATTTACACTTGCTGCTTTACTTCAAGGCTTTGATTTTGCAACCCCA
TCAAATGAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAA
AGCTAGACCACTTGAAG
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