FC921929

Overview
NameFC921929
Unique NameFC921929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length267
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2429 contig Csv1_Contig2429:92..358. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.075e-13
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 3
Query:   24 KFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPS---NEPVDMGEALGLSIQKARPL 263
            KF+PER L  +  +D RG NFEL+PFG+GRR CP +SFA+ ++E TLA L+  +D+  P     +  ++ E+ G+ I +  PL
Sbjct:  402 KFRPERHL--NSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPL 482          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.055e-12
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            VW+ P +F+PERFL   +D+D++G +F LLPFG+GRR CPG    + ++   ++ LL  F +  P     E +DM E  GL      P++
Sbjct:  402 VWKNPFEFRPERFL--EEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQ 489          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.055e-12
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRH--KDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP-SNEPVDMGEALGLSIQKARPL 263
            VW +P  F PERF+      D+DVRG +  L PFG+GRR CPG +  L  +   +A L+  FD+  P  + PV + E L LS++   PL
Sbjct:  455 VWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPL 543          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.377e-12
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQK 251
            +W E  +F PERF+ R   I+ +  +FE +PFG+GRR CPG++F L  +E+ LA L+  FD+  P    NE + M E  G+++ +
Sbjct:  401 LWTEAERFYPERFIER--SIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVAR 483          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.377e-12
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE 209
            +W  P +F P+RFL     ID RG NFELLPFGSGRR CPG++  + ++E  L  LL  FD+  P  E
Sbjct:  404 LWTNPDEFNPDRFLD--SSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKE 469          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.377e-12
Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN-EPVDMGEALGLSIQKARPLE 266
            W+ P +F PERF+     +D +G +FE LPFGSGRR CPG++ A+  +E TL  LL  FD+  P   + ++M E+  ++I K  PLE
Sbjct:  410 WKNPEEFNPERFIDC--PVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLE 494          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 3
Query:   24 KFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDF---ATPSNEPVDMGEALGLSIQKARPL 263
            +F+PER L     +D RG NFE +PFGSGRR CPG+ FA+ ++E TLA L+  F++   A  S +  D+ EA G+ + +  PL
Sbjct:  409 EFRPERHLD--SPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPL 489          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.069e-12
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATP---SNEPVDMGEALGLSIQKARPLE 266
            +W  P +F P+RFL     ID RG NFELLPFGSGRR CPG++  +  +E  L  LL  FD+  P   + + +++ E   + I K   LE
Sbjct:  410 LWTNPDEFNPDRFLD--SSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLE 497          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.008e-12
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 3
Query:    9 WEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSNE-PVDMGEALG 236
            W++P +F+PERFL     ++  G +F  LPFG GRR+CPG+  AL ++  TL  L+Q F+   P  +  +D  E  G
Sbjct:  409 WKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGG 485          
BLAST of FC921929 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.008e-12
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 3
Query:    6 VWEEPCKFQPERFLTRHKDIDVRGQNFELLPFGSGRRACPGVSFALQVMEFTLAALLQGFDFATPSN---EPVDMGEALGLSIQKARPLE 266
            VW  P +++PERFL   ++ID++G +F +LPFG+GRR CPG    + ++   +  LL  F+++ P     E V+M E+ GL      PL+
Sbjct:  405 VWSNPLEYRPERFL--EENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQ 492          
The following BLAST results are available for this feature:
BLAST of FC921929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
C71AM_ARATH8.075e-1343.37Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH1.055e-1238.89Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C78AB_ORYSJ1.055e-1241.57Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C71D9_SOYBN1.377e-1240.00Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BS_ARATH1.377e-1250.00Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH1.377e-1243.68Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH1.799e-1244.58Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH3.069e-1242.22Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_CICAR4.008e-1240.26Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C98A1_SORBI4.008e-1237.78Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]

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Properties
Property NameValue
Genbank descriptionC06054A10T7 RindPdigS Citrus sinensis cDNA clone C06054A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921929 ID=FC921929; Name=FC921929; organism=Citrus sinensis; type=EST; length=267bp
ACGNTGTCTGGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACA
AGGCACAAGGATATTGATGTCAGAGGACAAAATTTTGAATTGTTACCTTT
TGGTAGTGGTAGAAGAGCTTGTCCTGGAGTTTCATTTGCCCTCCAAGTTA
TGGAATTTACACTTGCTGCTTTACTTCAAGGCTTTGATTTTGCAACCCCA
TCAAATGAACCGGTGGACATGGGAGAGGCACTAGGGTTGAGTATCCAGAA
AGCTAGACCACTTGAAG
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