DN617935

Overview
NameDN617935
Unique NameDN617935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 4.162e-39
Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = -2
Query:  229 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 528
            +IEKMVQE EKYKAED+E KKKV+ KNALENYAY+MRNTI D+KI++KLPT DKKKIED ++ AI  LDGNQL E +EFEDKMKELE +CNPIIAKMYQG
Sbjct:  128 DIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELESLCNPIIAKMYQG 227          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 4.031e-34
Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ---------GGGADAGASMDEDXXXXXXXXXXXPKIEEVD 528
            EIE+MVQEAEKYKA DDE  KKVEAKN+LENYAYNMRNTI+++K++++L  +DK+ +E A+  A+ WL+ NQ+AE +EFE  +KELEG+CNPII ++YQ         GGGA AGA+               PKIEEVD
Sbjct:  520 EIERMVQEAEKYKA-DDEQLKKVEAKNSLENYAYNMRNTIREDKVASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLKELEGLCNPIITRLYQGGAGAGGMPGGGAGAGAA-------PSGGSGAGPKIEEVD 650          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.457e-33
Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 528
            EIE+MVQEAEKYKA+D+  K ++ AKNALE+YA+NM+ TI+DEK+  K+   DKKKI++  +E ++WLDGNQ AE DEFE + KELE +CNPII K+YQ  G   G
Sbjct:  513 EIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPG 618          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.889e-32
Identity = 65/107 (60.75%), Postives = 84/107 (78.50%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAG 528
            EIE+MVQEAEKYKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+++YQG GG  AG
Sbjct:  514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQGAGGPGAG 620          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.889e-32
Identity = 65/107 (60.75%), Postives = 84/107 (78.50%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAG 528
            EIE+MVQEAEKYKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+++YQG GG  AG
Sbjct:  514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQGAGGPGAG 620          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 2.889e-32
Identity = 65/107 (60.75%), Postives = 84/107 (78.50%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAG 528
            EIE+MVQEAEKYKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+++YQG GG  AG
Sbjct:  514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQGAGGPGAG 620          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.927e-32
Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 528
            +I++MV EAEKYK+ED+ +K ++EAKN LENY+YN+RNT+ DEK+  ++P  DKK IED + E I WLD NQ AE +E+E K KELEGI NPI+ KMY   GA  G
Sbjct:  517 DIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMYAAAGAAGG 622          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.405e-32
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = -2
Query:  223 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 528
            EIE+MVQEAEKYKAED+  +++V AKNALE+YA NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+ +YQGGG
Sbjct:  511 EIERMVQEAEKYKAEDEVQRERVSAKNALESYALNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGGG 612          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.098e-31
Identity = 65/107 (60.75%), Postives = 83/107 (77.57%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAG 528
            EIE+MVQEAEKYKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+ +YQG GG  AG
Sbjct:  514 EIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGAG 620          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.434e-31
Identity = 62/102 (60.78%), Postives = 80/102 (78.43%), Query Frame = -2
Query:  223 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 528
            EIE+MVQEAEKYKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+ +YQG G
Sbjct:  514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAG 615          
The following BLAST results are available for this feature:
BLAST of DN617935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
HSP70_LUPPO4.162e-3977.00Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]
HSP70_CHLRE4.031e-3455.40Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_BRUMA4.457e-3359.43Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HS71B_BOVIN2.889e-3260.75Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU2.889e-3260.75Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN2.889e-3260.75Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP70_BRELC4.927e-3258.49Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP71_CERAE8.405e-3261.76Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HS71B_PIG1.098e-3160.75Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP71_PONAB1.434e-3160.78Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01O06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617935 ID=DN617935; Name=DN617935; organism=Citrus sinensis; type=EST; length=529bp
TTAAAAACATAATATTCTTTATGCATACACCAGGAAACAGTATTTACATG
TAACAGAAGCAGGAAAAGGAAGAAAAGATCACACTCCCAACTCAACCCCT
AATCATTAAACAACATTAAGCATAAATCCTCAAATTTAATCCACCTCCTC
AATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCTCAT
CCATACTTGCACCAGCATCAGCTCCACCTCCTTGGTACATCTTGGCAATA
ATTGGGTTGCAGATGCCCTCCAGCTCTTTCATCTTATCTTCAAACTCATC
TGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTCCTCAATGG
CATCTTCAATTTTCTTCTTGTCAGCAGTGGGAAGCTTTGCGCTGATCTTT
TCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGAGCATT
CTTGGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATTTTT
CTGCCTCTTGTACCATCTTCTCTATCTCC
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