DN617935

Overview
NameDN617935
Unique NameDN617935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 7.867e-30
Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = -2
Query:  220 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA 528
            EIE+MVQEAE+YKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE +EF  K +ELE +CNPII+ +YQG GA
Sbjct:  514 EIERMVQEAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSNTLAEKEEFVHKREELERVCNPIISGLYQGAGA 616          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.027e-29
Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = -2
Query:  208 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAGA 528
            EIE+MV EAEKYKAED+E   ++ ++NALE+YAYN+RN++ DEK++ K   ADKKK+EDA+   I WLD +Q A  +E+E+  KELE + NPI+ K+Y G GGA  GA
Sbjct:  512 EIERMVNEAEKYKAEDEEATARITSRNALESYAYNLRNSLTDEKLADKFDAADKKKLEDAVNSTISWLDNSQEASKEEYEEHQKELEAVANPIMQKLYAGAGGAPGGA 619          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.753e-29
Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = -2
Query:  226 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 528
            EIE+MVQEAE+YKAED+  ++K+ AKNALE+YA+NM++ + DE +  K+  +DKKKI D   E + WL+ NQLAE +EF+ K KELE +CNPII K+YQ G
Sbjct:  516 EIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFDHKRKELENMCNPIITKLYQSG 616          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.289e-29
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 528
            +IE+MVQEAEKYK EDD  + KV +KN+LE+YA+NM++T++DEK+  K+   DK KI +   E I WLD NQ AE +E+E   KELE +CNPII K+YQG G   G
Sbjct:  514 DIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPG 619          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.289e-29
Identity = 55/106 (51.89%), Postives = 82/106 (77.36%), Query Frame = -2
Query:  211 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 528
            EIE+MV +AEK+K ED++ + +V AKN LE+YA++M++T++DEK+  K+  +D+++I +  EE ++WLDGNQ AE +E+E + KELE +CNPIIAKMYQ  G   G
Sbjct:  516 EIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQEAGGVGG 621          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.289e-29
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = -2
Query:  226 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 528
            EIE+MV +AEKYKAED+  ++K+ AKNALE+YA+NM++ + DE +  K+  +DKKKI     E + WL+ NQLAE DEF+ K KELE +CNPII K+YQGG
Sbjct:  516 EIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQGG 616          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.904e-29
Identity = 53/111 (47.75%), Postives = 83/111 (74.77%), Query Frame = -2
Query:  196 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDE 528
            +IE+MVQ+A+KYKAEDD  ++K+ AKN+LE+YA+NM+++++D+ +  K+   DKKK+ D  ++ I WL+ NQL + +E+E ++KELE +C PII K+YQ GG   G   D+
Sbjct:  516 DIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQQGGMPTGCCGDQ 626          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.099e-29
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = -2
Query:  226 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 528
            EIE+MV +AEKYKAED+  ++K+ AKNALE+YA+NM++ + DE +  K+  +DK KI D   E + WL+ NQLAE DEF+ K KELE +CNPII K+YQGG
Sbjct:  516 EIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKELEQMCNPIITKLYQGG 616          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 6.660e-29
Identity = 58/103 (56.31%), Postives = 79/103 (76.70%), Query Frame = -2
Query:  220 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA 528
            EIE+MVQEAE+YKAED+  + +V AKNALE+YA+NM++ ++DE +  KL  ADKKK+ D  +E I WLD N LA+ +EF  K +ELE +C+PII+ +YQG GA
Sbjct:  514 EIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGA 616          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 6.660e-29
Identity = 58/103 (56.31%), Postives = 79/103 (76.70%), Query Frame = -2
Query:  220 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA 528
            EIE+MVQEAE+YKAED+  + +V AKNALE+YA+NM++ ++DE +  KL  ADKKK+ D  +E I WLD N LA+ +EF  K +ELE +C+PII+ +YQG GA
Sbjct:  514 EIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGA 616          
The following BLAST results are available for this feature:
BLAST of DN617935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
HSP71_RAT7.867e-3057.28Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP71_PUCGR1.027e-2955.56Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HS71L_RAT1.753e-2957.43Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HSP70_ONCMY2.289e-2955.66Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_ECHGR2.289e-2951.89Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HS71L_BOVIN2.289e-2957.43Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP70_ONCTS3.904e-2947.75Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS71L_HUMAN5.099e-2957.43Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HS71B_MOUSE6.660e-2956.31Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE6.660e-2956.31Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01O06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617935 ID=DN617935; Name=DN617935; organism=Citrus sinensis; type=EST; length=529bp
TTAAAAACATAATATTCTTTATGCATACACCAGGAAACAGTATTTACATG
TAACAGAAGCAGGAAAAGGAAGAAAAGATCACACTCCCAACTCAACCCCT
AATCATTAAACAACATTAAGCATAAATCCTCAAATTTAATCCACCTCCTC
AATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCTCAT
CCATACTTGCACCAGCATCAGCTCCACCTCCTTGGTACATCTTGGCAATA
ATTGGGTTGCAGATGCCCTCCAGCTCTTTCATCTTATCTTCAAACTCATC
TGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTCCTCAATGG
CATCTTCAATTTTCTTCTTGTCAGCAGTGGGAAGCTTTGCGCTGATCTTT
TCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGAGCATT
CTTGGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATTTTT
CTGCCTCTTGTACCATCTTCTCTATCTCC
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