DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 2.367e-78 Identity = 144/162 (88.89%), Postives = 156/162 (96.30%), Query Frame = 2 Query: 77 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 YG+ QKIDYVFKVVLIGDSAVGKSQLLARFARNEF++DSKATIGVEFQT+TL ID +TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWL+ELRGHADKNIVIMLIGNK DLG+LR VPTEDA+EFA+RENLFFMETSALE+TNVE Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVE 169
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 4.936e-76 Identity = 139/163 (85.28%), Postives = 154/163 (94.48%), Query Frame = 2 Query: 77 YGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVET 565 YGD N KIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSK+TIGVEFQT+TL IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HADKNIVI+LIGNKCDL + R VPTEDA+EFA++E LFF+ETSALEATNVE+ Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVES 169
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.449e-75 Identity = 138/166 (83.13%), Postives = 156/166 (93.98%), Query Frame = 2 Query: 65 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 M++ YGD +QKIDYVFKVVLIGDSAVGKSQ+LARFARNEFS+DSKATIGVEFQT+TL+I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+NIVIMLIGNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EATN+E Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLE 166
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 2.293e-73 Identity = 135/166 (81.33%), Postives = 153/166 (92.17%), Query Frame = 2 Query: 65 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 M++ YGD +QKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TL I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWL+ELR HAD+NIVIML GNK DL RAVPTEDA+EFAQ+E LFF+ETSA+EAT +E Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLE 166
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 5.298e-62 Identity = 114/158 (72.15%), Postives = 138/158 (87.34%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 + + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKTL++D K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F++ ARWL ELR H D NIV+MLIGNK DL L AVPTED + FA+RE+L+FMETSALEATNVE Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVE 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 7.650e-61 Identity = 110/158 (69.62%), Postives = 138/158 (87.34%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +++ DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TKT ++ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+L+YD+T+ +F++ ARWL ELRGH D NIV+MLIGNKCDL L AV TE+A+ FA+RE+L+FMETSAL+ATNVE Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVE 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 230.72 bits (587), Expect = 3.797e-60 Identity = 110/158 (69.62%), Postives = 134/158 (84.81%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +Q+ DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+T ++ KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK DL LR+V ED Q A++E L F+ETSALEATNVE Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVE 163
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 3.797e-60 Identity = 112/158 (70.89%), Postives = 137/158 (86.71%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL ++ +TVKAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++++RWL ELR HAD NIVIMLIGNK DL LRAV TEDAQ +A++E L F+ETSALEA NVE Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVE 163
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.105e-59 Identity = 109/154 (70.78%), Postives = 135/154 (87.66%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK+VLIGDS VGKS LL+RF+RNEF+++SK+TIGVEF T+++ +D K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F+++ RWL ELR H D+NIVIML+GNK DL LRAV TEDA+ FA+REN FFMETSALE+ NVE Sbjct: 12 DYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVE 165
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 229.18 bits (583), Expect = 1.105e-59 Identity = 108/161 (67.08%), Postives = 138/161 (85.71%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ NL F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVE 162 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |