DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 8.230e-39 Identity = 80/158 (50.63%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 ++ D++FK ++IG++ GKS LL +F +F DS TIGVEF +K +++ K VK QIWDTAGQER+R+VT +YYRGA GA+LVYD+T R++++ + WL + R A +NIVI+L GNK DL + R V +A FAQ L F+ETSAL NVE Sbjct: 2 SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.230e-39 Identity = 81/162 (50.00%), Postives = 114/162 (70.37%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQR-ENLFFMETSALEATNVE 562 GD +++ D++FK+VL+GD++VGK+ ++ RF FS +TIGV+F KTL I K VK QIWDTAGQER+R +T +YYR A GA+L YD+TKR SF + W++++R +A NIV +LIGNK DL LR V +AQ A+ + L +ETSA +++NVE Sbjct: 9 GDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVE 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.075e-38 Identity = 79/162 (48.77%), Postives = 113/162 (69.75%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQR-ENLFFMETSALEATNVE 562 GD ++ D++FK+VL+GD++VGK+ ++ RF FS +TIGV+F KTL I K VK QIWDTAGQER+R +T +YYR A GA+L YD++KR +F + W++++R +A NIV +LIGNK DL R VP +AQ A+ + L +ETSA +++NVE Sbjct: 7 GDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVE 168
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 73/154 (47.40%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ LL RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G M VYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + F+ETSA + NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNKCD+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |