DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.404e-38 Identity = 78/158 (49.37%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N D +FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+ +TS+YYRGA G ++VYD+T ++S+ ++ +WL E+ HA +N+ +L+GNK DL + + V A+EFA + F+ETSA ATNVE Sbjct: 2 NPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.395e-38 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KTVK QIWDTAGQER+R +TS+YYRGA G +VYD+T SF+++ +WL E+ +A + + +L+GNK D+ + V A+EFA + F+ETSA A+NVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.127e-38 Identity = 78/158 (49.37%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 ++ D++FK ++IG++ GKS LL +F +F DS TIG+EF +K +++ K VK QIWDTAGQER+R+VT +YYRGA GA+LVYD+T R++++ + WL + R A +NIV++L GNK DL + R V +A FAQ L F+ETSAL NVE Sbjct: 2 SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.335e-38 Identity = 72/154 (46.75%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SF+++ W+ + HA ++ M++GNKCD R V E ++ A + FMETSA N+E Sbjct: 6 DYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.967e-38 Identity = 75/155 (48.39%), Postives = 106/155 (68.39%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVET 565 +Y K ++ G VGKS LL +F EFS + TIGVEFQT+++ ID +K +IWDTAGQE +R++T+ YYRGA A+L YD+TKRQSF +++ W+DE+R + NIVI LIGNKCD R + TE+ + A+ ++ F ETSA + +VE+ Sbjct: 3 EYHLKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSPNIVIALIGNKCDCKDKRVITTEEGAKNAKENDILFFETSAKDYESVES 157
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 9.100e-38 Identity = 73/154 (47.40%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+ K++LIGDS VGKS LL RF+ + F+ TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G +L+YD+T ++SFD++ W + HA +N+ +LIGNKCD R V E Q A + F+E SA NV+ Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVD 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.552e-37 Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG-SLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+ K++LIGDS VGKS LL RF+ F+ TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T SF+++ W+ + HA N+ +L+GNK D+ S RAVPT Q A + F ETSA NVE Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVE 167
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.552e-37 Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLG-SLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+ K++LIGDS VGKS LL RF+ F+ TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T SF+++ W+ + HA N+ +L+GNK D+ S RAVPT Q A + F ETSA NVE Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVE 167
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.027e-37 Identity = 75/158 (47.47%), Postives = 114/158 (72.15%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 + + DY+FK++LIGDS+VGKS LL RFA + + +TIGV+F+ +T+ D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD T+ +SF+++ +WL E+ +A++++ +LIGNK D+ + V TE + A + F+ETSA ++ NVE Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.027e-37 Identity = 76/158 (48.10%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N Y+FK++LIGDS VGKS LL RFA + +S +TIGV+F+ +T+ ++ KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T + +F+++ +WL E+ A +N+ +L+GNK DL + + V A+ FA + F+ETSA ++TNVE Sbjct: 2 NPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVE 159 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |