DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.648e-37 Identity = 68/154 (44.16%), Postives = 111/154 (72.08%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D++FK++LIGDS VGK+ L+ RFA + F+ +TIG++F+ +T+ I+ K +K Q+WDTAGQER++ +T+AYYRGA+G +LVYD+T +SF+++ W+ ++ +A + +L+GNKCD+ + R V E A++ A+ + F ETSA + NV+ Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVD 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 73/154 (47.40%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ +T+ +D K +K QIWDTAGQER+R +T+AYYRGA+G MLVYD+T +SFD++ W+ + HA ++ M++GNK D+ R V E ++ A + FMETSA NVE Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 71/154 (46.10%), Postives = 105/154 (68.18%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+ K++LIGDS VGKS LL RF+ + F+ TIG++F+ +T+ ++ K +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T +SF ++ W+ + HA ++ MLIGNKCD+ + V + + A + F+ETSA + NVE Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVE 166
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 68/154 (44.16%), Postives = 110/154 (71.43%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D++FK++LIGDS VGK+ L+ RFA + F+ +TIG++F+ +T+ I+ K +K Q+WDTAGQER++ +T+AYYRGA+G +LVYD+T +SF+++ W+ ++ +A + +L+GNKCD+ + R V E A+ A+ + F ETSA + NV+ Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVD 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 70/154 (45.45%), Postives = 109/154 (70.78%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D +FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYD+T +SF+++++WL + HA++++ ML+GNKCD+ R VP ++ A+ + F ETSA N+E Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIE 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 70/154 (45.45%), Postives = 109/154 (70.78%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D +FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYD+T +SF+++++WL + HA++++ ML+GNKCD+ R VP ++ A+ + F ETSA N+E Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIE 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 70/154 (45.45%), Postives = 109/154 (70.78%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D +FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYD+T +SF+++++WL + HA++++ ML+GNKCD+ R VP ++ A+ + F ETSA N+E Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIE 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.516e-37 Identity = 75/170 (44.12%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 56 ASTMSNLYG-DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +++ S ++G + + + D + K+++IGDS VGKS +L RFA N F+ +TIGV+F +T+ +D K +K QIWDTAGQER++ +T++YYRGA G ++VYD+T SF+ + RWL ++ A +++ +++GNKCDL S RAV + A++FA N+ METSA E+T ++ Sbjct: 15 STSTSFIHGSESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAID 184
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.516e-37 Identity = 70/154 (45.45%), Postives = 109/154 (70.78%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D +FK++LIGDS VGK+ +L RF+ + F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYD+T +SF+++++WL + HA++++ ML+GNKCD+ R VP ++ A+ + F ETSA N+E Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIE 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.898e-37 Identity = 70/154 (45.45%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D + K++LIGDS VGKS LL RF ++F+ TIG++F+ +T+ I ++ VK Q+WDTAGQER+R +T+AYYRGA+G +LVYD+T +SF+++ W ++ +A++ + ++L+GNKCDL R V TE Q A + + F+E S+ NVE Sbjct: 9 DLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVE 162 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |