DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.006e-36 Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 FK+VL+G+SAVGKS L+ RF + +F ++TIG F T+T+ +D TVK +IWDTAGQERY ++ YYRGA A++VYD+T +SF W+ EL+ A NIVI L GNK DL + RAV ++AQ +A +L FMETSA + NV Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.006e-36 Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 FK+VL+G+SAVGKS L+ RF + +F ++TIG F T+T+ +D TVK +IWDTAGQERY ++ YYRGA A++VYD+T +SF W+ EL+ A NIVI L GNK DL + RAV ++AQ +A +L FMETSA + NV Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.006e-36 Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 FK+VL+G+SAVGKS L+ RF + +F ++TIG F T+T+ +D TVK +IWDTAGQERY ++ YYRGA A++VYD+T +SF W+ EL+ A NIVI L GNK DL + RAV ++AQ +A +L FMETSA + NV Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.006e-36 Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 FK+VL+G+SAVGKS L+ RF + +F ++TIG F T+T+ +D TVK +IWDTAGQERY ++ YYRGA A++VYD+T +SF W+ EL+ A NIVI L GNK DL + RAV ++AQ +A +L FMETSA + NV Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.006e-36 Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 104 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 Y+ K ++IG +VGKS LL RF N+F S TIGV+F ++ + I K VK QIWDTAGQER+R+V +YYRG+ G LVYD+T R+S++H+ WL +++ A ++ I+L+GNK DL R V +A AQ L FMETSAL VE Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSALTGEGVE 158
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.314e-36 Identity = 73/159 (45.91%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLF-FMETSALEATNVE 562 ++ DY+FK++LIGDS VGK+ ++ F ++ + TIGV+F ++L ID K VK Q+WDTAGQER+R +T +YYR A A++ YD+T+R +F+ + W+ E+ + N+VIMLIGNKCDL R V EDA A++ L +ETSA E+ N+E Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIE 169
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.314e-36 Identity = 68/154 (44.16%), Postives = 110/154 (71.43%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D++FK++LIGDS VGK+ L+ RFA + F+ +TIG++F+ +T+ I+ K +K Q+WDTAGQER++ +T+AYYRGA+G +LVYD+T +SF+++ W+ ++ +A + +L+GNKCD+ + R V E A + A+ + F ETSA + NV+ Sbjct: 6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVD 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.314e-36 Identity = 69/154 (44.81%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D +FK++LIGDS VGK+ +L RF+ + F+ +TIG++ + KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYD+T +SF+++++WL + HA++++ ML+GNKCD+ R VP ++ A+ + F ETSA N+E Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIE 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.716e-36 Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D++ K++LIGDS VGKS LL RF+ F+ ATIG++F+ +T+ ++ K +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T +SF + W+ + HA ++ MLIGNKCD+ + V + + A + F+ETSA + NVE Sbjct: 13 DFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVE 166
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.823e-36 Identity = 70/161 (43.48%), Postives = 111/161 (68.94%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G +Q DY+FK+++IG+S+VGK+ L R+ + F+ +T+G++F+ KT+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ +N ++L+GNKCD+ S R V + ++ A + L F ETSA E NV+ Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVK 173 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |