DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.897e-35 Identity = 74/150 (49.33%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 FK+VL+G+SAVGKS L+ RF + +F ++TIG F T+++ +D TVK +IWDTAGQERY ++ YYRGA A++VYD+T +++F W+ EL+ A +IVI L GNK DL + R V E+AQ +A +L FMETSA A NV Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNV 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.897e-35 Identity = 74/150 (49.33%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 FK+VL+G+SAVGKS L+ RF + +F ++TIG F T+++ +D TVK +IWDTAGQERY ++ YYRGA A++VYD+T +++F W+ EL+ A +IVI L GNK DL + R V E+AQ +A +L FMETSA A NV Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNV 170
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.897e-35 Identity = 68/158 (43.04%), Postives = 109/158 (68.99%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YD+T SF+ + W+ +++ ++ N ++L+GNKCD+ R + E ++ A + + F ETSA E NV+ Sbjct: 15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVK 172
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.897e-35 Identity = 74/155 (47.74%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSK-ATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D FKV+L+GDS VGK+ LL RF F + +T+G++F+ K L +D VK QIWDTAGQER+R+VT AYYR A +L+YD+T + SFD++ WL E++ +A +++V+ML+GNK D R V ED ++ A+ L FMETSA NV+ Sbjct: 62 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVD 216
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.897e-35 Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLF-FMETSALEATNVE 562 ++ DY+FK++LIGDS VGK+ ++ F + + TIGV+F + L ID K VK Q+WDTAGQER+R +T +YYR A A++ YD+T+R +F+ + W+ E+ + N+VIMLIGNKCDL R V EDA A++ L +ETSA E+ N++ Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNID 169
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 69/157 (43.95%), Postives = 108/157 (68.79%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R VPTE + A++ F E SA E +V Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISV 172
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 69/157 (43.95%), Postives = 108/157 (68.79%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R VPTE + A++ F E SA E +V Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISV 172
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 69/157 (43.95%), Postives = 108/157 (68.79%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R VPTE + A++ F E SA E +V Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISV 172
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 70/173 (40.46%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 53 VASTMSNLYGDY---NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +AS + YG +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R V +E ++ A F E SA + NV+ Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVK 173
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 70/173 (40.46%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 53 VASTMSNLYGDY---NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +AS + YG +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R V +E ++ A F E SA + NV+ Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVK 173 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |