DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 70/173 (40.46%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 53 VASTMSNLYGDY---NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +AS + YG +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R V +E ++ A F E SA + NV+ Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVK 173
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 70/173 (40.46%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 53 VASTMSNLYGDY---NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +AS + YG +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R V +E ++ A F E SA + NV+ Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVK 173
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.478e-35 Identity = 70/173 (40.46%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 53 VASTMSNLYGDY---NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +AS + YG +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R V +E ++ A F E SA + NV+ Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVK 173
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB5A_DICDI (Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.236e-35 Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 N KI + FK+VL+G++AVGKS L+ RF R F ++TIG F +T+ ++ TVK +IWDTAGQERY + YYRGA A++VYD+ SF+ +W+ EL+ NIVI L GNK DL + R V T +AQ++A+ L FMETSA + NV Sbjct: 4 NNKI-FQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNV 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.236e-35 Identity = 68/158 (43.04%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L GNKCD+ R V TE Q ++ F ETSA + NV+ Sbjct: 24 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVK 181
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.236e-35 Identity = 68/158 (43.04%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ + K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L GNKCD+ R V TE Q ++ F ETSA + NV+ Sbjct: 24 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVK 181
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 3.236e-35 Identity = 68/157 (43.31%), Postives = 108/157 (68.79%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNV 559 +Q DY+FK+++IG+S+VGK+ L R+A + F+ +T+G++F+ KT+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YD+T +SF+ + W +++ ++ N ++L+GNKCD+ R +PTE + A++ F E SA E +V Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISV 172
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.236e-35 Identity = 74/155 (47.74%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSK-ATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D FKV+L+GDS VGK+ LL RF F + +T+G++F+ K L +D VK QIWDTAGQER+R+VT AYYR A +L+YD+T + SFD++ WL E++ +A +++V+ML+GNK D R V ED ++ A+ L FMETSA NV+ Sbjct: 65 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVD 219
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.236e-35 Identity = 68/154 (44.16%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 D +FK++LIGDS VGK+ +L RF+ + F+ +TI ++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYD+T +SF+++++WL + HA++++ ML+ NKCD+ R VP ++ A+ + F ETSA N+E Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIE 160
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.227e-35 Identity = 70/158 (44.30%), Postives = 105/158 (66.46%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 +Q DY+FK++LIG+S+VGK+ L R+A + F+ +T+G++F+ KT+ K +K QIWDTAGQERYR +T+AYYRGA+G +L+YD+ ++SF + W +++ ++ N ++L+GNKCDL R V ED Q A F E SA E NV+ Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVK 173 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |