CX045923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_GEOSF (Dihydroorotate dehydrogenase OS=Geobacter sp. (strain FRC-32) GN=pyrD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14 Identity = 59/214 (27.57%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 232 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 A+PDLS+ ++G+++ NP + SG G E GA++ K +SL K N TPR G + IG +N+ + + + E +++ + +EEY + A E +DR+ E + +EVN SCP+ ++ G G D EV G + + P+ K++PN+TD+ A + +G++ +S INT+ Sbjct: 2 AKPDLSVEISGIKLRNPVMTASGTFGYGKEFSDYLDLEKIGAIITKGLSL-RPKAGNPTPRIVETPGGMLNA-----IGLQNVGI------DAFIGEKLPFLRTVDTPVIVNLYGNTLEEYGELA--EKLDRLPE--VAGLEVNISCPN---VKQGGIVFGTDPNAAAEVVGLVRRSTSKPLIIKLSPNVTDVVRMADACVNAGADALSLINTL 196
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_AQUAE (Dihydroorotate dehydrogenase OS=Aquifex aeolicus GN=pyrD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14 Identity = 66/214 (30.84%), Postives = 98/214 (45.79%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP-----DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 DLS+ + G++ NP + SG G + GAVV K +SL ++ N TPR G S Q G E K LK +YP D IA++ E + E + + I A E+N SCP+ +K G G D +L + I AK P+ K++PN+TD+TE A+V + +G++G+ INT+M Sbjct: 2 DLSVELFGIRFKNPVWVASGTFGYGVEAAEIYDISKLGAVVTKGLSLKE-RLGNETPRIVETPCGMLNSIGLQNPGVE-----------------KFLKEIYPKIKDVDTHFIANVFGETEEEYVEVCMALEDADKIVAYELNVSCPN---VKKGGILFGHDPVILGNLVDRIKAKIKKPLLVKLSPNVTDVTEFAKVCIENGADGLVLINTLM 194
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_THEAC (Dihydroorotate dehydrogenase OS=Thermoplasma acidophilum GN=pyrD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14 Identity = 59/212 (27.83%), Postives = 106/212 (50.00%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWE----NIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 DLS +V G+++ NP ++ SG N M + G AVV K++ ++ NG + I+ + N +S+ ++ +E + K K +I S+ + ++ L +++E G DA+E+N SCPH + G VG D L+E++ + +K +VPV+AK++PN++DI E A+ A + ++ INT+ Sbjct: 3 DLSTSVAGIRLENPLMLASGILDENGYTMLDVMNNGAAAVVTKSIGMEER----------------NGYSAPVIVEYGDSLINAVGLSNPGIDNFAEEIRIAKR--SGKPVIGSVFAS-DAESFVNLGRKMQEYGCDAVELNLSCPH---VKGFGLEVGSDPDLVEDIVNEMKSKISVPVFAKLSPNVSDIIEIAKAAEK--ADAYVLINTV 190
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_METMA (Dihydroorotate dehydrogenase OS=Methanosarcina mazei GN=pyrD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 65/208 (31.25%), Postives = 96/208 (46.15%), Query Frame = 1 Query: 244 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 L T+ GL++ NP ++ +G GT + R EG GAVV K++ A K + P L G + N + + L+E + K D +IASI + + E+ + + DA E+N SCPH GAA+G + L+E V + VPVW K+TPN+ DIT A G++ V AINT+ Sbjct: 13 LMYTLTGLKLKNPTILAAGVLGTTGASLCRVAREGGAGAVVTKSIG-PAPKTGHPNPSMIELDCG-----------FLNAMGLPNPSYPGFLQELEFAKE-NSDAPVIASIFGG-TPSEFAEVAEGLLPAKPDAFELNVSCPHA---EGYGAAIGSNPCLVEAVTAAVKDVVNVPVWVKLTPNVADITCIGNAAESGGADAVVAINTV 203
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_LACH4 (Dihydroorotate dehydrogenase OS=Lactobacillus helveticus (strain DPC 4571) GN=pyrD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 58/208 (27.88%), Postives = 106/208 (50.96%), Query Frame = 1 Query: 250 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 + + GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ +L+ YPD ++AS+ + ++ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TPN+TDI E A+ A G++G+S INT++ Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTTPHATTG-NPQPQIAILEDGVLNS----------VGLTNPGVDQVISEKLTKLRHQYPDLPIMASVGGD-SEDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTLL 198
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_ALKOO (Dihydroorotate dehydrogenase OS=Alkaliphilus oremlandii (strain OhILAs) GN=pyrD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.982e-13 Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 ++ + + G+Q+ NP + SG G+ + GAVV K V+ + N TPR A G S +G +N +E +K+ Q Y KI++ + A + ++ +++ + ID IE+N SCP+ + G G + ++EEV + A P+ K+TPN+TDI E A+ A+ G++ +S INT++ Sbjct: 5 NMGVHIAGIQLKNPVMTASGTFGSGREYSEFVDLNQLGAVVVKGVANEPWSG-NPTPRIAETYGGMLNS-----VGLQN------PGVEAFIKDDIQFLRQYDTKIIVN--IAGRTVADYCKVTEKLGDADIDLIELNISCPN---VKAGGVNFGTNPAMVEEVTKAVKKVARQPLIVKLTPNVTDIVEIAKAAVAGGADAISLINTLL 196
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_ANATD (Dihydroorotate dehydrogenase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=pyrD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 62/210 (29.52%), Postives = 106/210 (50.48%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 +L + + G+++ NP + SG G K +GA+ K ++L ++ N PR + AG S +G EN +E + L LK F D +IA+I ++K + EL ++ + +D IEVN SCP+ ++ G G+D + + E+ + A+ P+ K+TPN+TDIT+ A A +G++ +S INT+ Sbjct: 2 NLEVEIAGIKLKNPVIAASGTFGFGREYSKLIDISEFGAICTKGITLKK-RIGNPQPRLCEVYAGIINS-----VGLENPGVEAFINDELP-FLKSF--------DTKIIANI-NGFSKEEFVELT-KILTSLVDMIEVNLSCPN---VKEGGMVFGKDPKKVYEITKSVKDVASCPIIVKLTPNVTDITQLAVAAENAGADAISLINTV 191
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_GEOBB (Dihydroorotate dehydrogenase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1 Query: 238 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 PD+S+ V G++M NP + SG G E GA+++K +SL K N TPR G + IG +N+ + D +E L K + P + L + +EEY + A +D + +G+ IEVN SCP+ ++ G G D +EV + T P+ K++PN+TD+ A+ +G++ +S INT+ Sbjct: 4 PDMSVAVAGIKMRNPVMTASGTFGYGAEFADYLDLECIGAMISKGLSLKP-KAGNPTPRIVETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKNVNT--PVIVNLYGNTLEEYGEVAAR--LDGL--SGVAGIEVNISCPN---VKQGGIVFGTDPGAAQEVVRLVKKNTTKPMIVKLSPNVTDVVLMAKACADAGADALSLINTL 196
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_GEOSM (Dihydroorotate dehydrogenase OS=Geobacter sp. (strain M21) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 62/210 (29.52%), Postives = 101/210 (48.10%), Query Frame = 1 Query: 238 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 PD+S+ V G++M NP + SG G E GA+++K +SL K N TPR G + IG +N+ + D +E L K + P + L + +EEY + A +D + G+ IEVN SCP+ ++ G G D +EV + + P+ K++PN+TD+ A+ +G++ +S INT+ Sbjct: 4 PDMSVAVAGIKMRNPVMTASGTFGYGAEFADYLDLESIGAMISKGLSLKP-KAGNPTPRIVETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKNVNT--PVIVNLYGNTLEEYGEVAAR--LDGL--AGVAGIEVNISCPN---VKQGGIVFGTDPGAAQEVVRLVKKNTSKPMIVKLSPNVTDVVVMAKACADAGADALSLINTL 196
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_CLOPH (Dihydroorotate dehydrogenase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=pyrD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 60/208 (28.85%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 247 SITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 ++T+ G+ NP SG G+ + GA+ K VS N PR A G + IG +N +++ +R L LK+F D +I ++ + K + E+++R+ E +D +E+N SCP+ ++ A GQD +++ + I A PV K++PN+TDITE A+ A G++ +S INT+ Sbjct: 4 NVTIAGVTFKNPVTTASGTFGSGMEYSEFVDLNRLGAITTKGVS-SVPWPGNPVPRIAETYGGMLNA-----IGLQNPGVDMFVERDL-AFLKQF--------DTKVIVNVCGKSVKE-YVEVVERLSEEAVDLLELNISCPN---VKEGCIAFGQDPKMIAMIMDEIKRHAKQPVIVKLSPNVTDITEMAKAAEAGGADALSLINTL 192 The following BLAST results are available for this feature:
BLAST of CX045923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX045923 ID=CX045923; Name=CX045923; organism=Citrus sinensis; type=EST; length=868bpback to top |