CX045923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_ALKMQ (Dihydroorotate dehydrogenase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pyrD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 59/212 (27.83%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 ++ + + G+++ NP + SG G+ + GAVV K V+ + K N +PR A G S +G +N + D +E + +Q Y KI++ +E+Y E++ ++ + +D +E+N SCP+ + G G D ++EEV + A P+ K+TPN+TDI A+ A+ G++G+S INT++ Sbjct: 5 NMKVNIAGVELKNPVMTASGTFGSGREYGEYVDLNQLGAVVVKGVANEPWKG-NPSPRIAETYGGMLNS-----VGLQNPGV--DEFIEKDIPFLRQ----YNTKIIVNIAGRTIEDYC-----EVVKKLGDADVDLLELNISCPN---VKAGGVCFGTDPFMVEEVTKAVKKVAKQPLIVKLTPNVTDIVPIAKAAVAGGADGISLINTLL 196
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_LACAC (Dihydroorotate dehydrogenase OS=Lactobacillus acidophilus GN=pyrD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 58/208 (27.88%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 250 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 IT+ GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ L+ YP+ ++AS+ + +++ + E+ ++ ++ ++A+E+N SCP+ + G + G ++EE+ I VP++ K+TPN+TDI A+ A + G++G+S INT++ Sbjct: 6 ITLPGLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTTPKATSG-NPQPQIAVLDDGVLNS----------VGLTNPGVDQVISEKLVPLRKQYPNLPIMASVGGD-SESDYVEVAKKLSDSDLVNALEINVSCPN---VAQGGMSFGVHPDVVEELTKKIKDVVDVPIYVKLTPNVTDIVAIAQAAEKGGADGISMINTVL 198
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_LACDB (Dihydroorotate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.678e-12 Identity = 57/208 (27.40%), Postives = 105/208 (50.48%), Query Frame = 1 Query: 250 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 + + GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ +L+ Y D ++AS+ + ++ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TPN+TDI E A+ A G++G+S INT++ Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTTPHATTG-NPQPQIAILEDGVLNS----------VGLTNPGVDQVISEKLTKLRHQYIDLPIMASVGGD-SEDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTVL 198
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_LACDA (Dihydroorotate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.678e-12 Identity = 57/208 (27.40%), Postives = 105/208 (50.48%), Query Frame = 1 Query: 250 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 + + GL + NP + SG G + FD GA+V KT + A N P+ A L G S + L + + + ++ +L+ Y D ++AS+ + ++ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TPN+TDI E A+ A G++G+S INT++ Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTTPHATTG-NPQPQIAILEDGVLNS----------VGLTNPGVDQVISEKLTKLRHQYLDLPIMASVGGD-SEDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYVKLTPNVTDIVEIAKAAESGGADGISMINTVL 198
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_GEOUR (Dihydroorotate dehydrogenase OS=Geobacter uraniireducens (strain Rf4) GN=pyrD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12 Identity = 59/211 (27.96%), Postives = 102/211 (48.34%), Query Frame = 1 Query: 235 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 +PDLS+ V G+++ NP + SG G E GA++ K +S+ K N TPR G + IG +N+ + D ++ L + + P + L + +EEY + A E +D++ E + +EVN SCP+ ++ G G D EV + P+ K++PN+T++ E A + +G++ +S INT+ Sbjct: 3 KPDLSVEVAGIKLRNPVMTASGTFGYGKEFADYLDLEKIGAIITKGLSI-RPKAGNPTPRIVETPGGMLNA-----IGLQNVGI--DAFIQEKLPFLRTVNT--PVIVNLYGNTLEEYGELA--EKLDKLPE--VAGLEVNISCPN---VKQGGIVFGTDPNAAYEVVSLVRESTIKPLIVKLSPNVTNVVEMANACVDAGADALSLINTL 196
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_PYRKO (Dihydroorotate dehydrogenase OS=Pyrococcus kodakaraensis GN=pyrD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 61/207 (29.47%), Postives = 92/207 (44.44%), Query Frame = 1 Query: 244 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 LSI ++GL+ NP ++ SG RA +EG G VV K++ ++ K + P L G + GW+ + ++ D LI SI + L +++ E DA E+N SCPH + G +GQ + V + PV AK+TPNI DIT+ A +G++ VSAINT+ Sbjct: 6 LSINLSGLEFENPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVELPYGLINAMGLPNPGWKGF--------------LEMVEGYSFDFPLIVSIFGG-TPEEFAFLAEKLSEVA-DAFELNLSCPHA---KGYGMEIGQKPENVYAVVKAVKDATDKPVIAKLTPNIDDITKLGLAAENAGADAVSAINTL 192
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_DESAD (Dihydroorotate dehydrogenase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=pyrD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 65/209 (31.10%), Postives = 98/209 (46.89%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 D+SI GL++ NP + SG G + E G +V K +SL + N PR A G + Q G E E I+ + + K L LY A+ EE+ + A E G+ A+EVN SCP+ ++ G A GQD + + +V + A P+ K++PN+TDIT A+ A G++ +S INT+ Sbjct: 2 DVSIDFAGLKLKNPILTASGTFGFGLEFQRYGDLESLGGIVVKGLSLKPREG-NPMPRIAETPCGMLNAIGIQNPGVE--EFINKKLPKLPWKTLPVLANLY------ATDAEEFGELAGV----LAGEEGVAALEVNVSCPN---VKEGGIAFGQDPKQITKVAEAVKKNAGNKPIIIKLSPNVTDITVCAKAAEDGGADALSLINTL 194
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_NATTJ (Dihydroorotate dehydrogenase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 61/209 (29.19%), Postives = 93/209 (44.50%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTI 864 DL + G+ M NP SG G + GA+V K ++L + T RL A+G IG EN + D + +L + +Q A I N + E+ ++ GI +EVN SCP+ R+ G G D L + + + PV K++PN+TDITE A+ R+G++G+S INT+ Sbjct: 3 DLKVNFAGIPMKNPVASASGTFGFGFEYQSVISPHELGALVVKGLTLSPKRGNQGT----RLHETASGLLNS--IGLENPGI--DNFINEILPDLRQCDATTLINI------SGGNDEEYVEITQKLNNCQGIAGLEVNISCPN---IREGGLVYGVDPELTYRLVSKVRQSTSFPVIVKLSPNVTDITEIAKACERAGADGLSLINTV 194
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_LISW6 (Dihydroorotate dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=pyrD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 59/209 (28.23%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 244 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 L++ + GL + NP + SG G K GA++AK V+ + ++ N TPR A +G + Q G E++ L + P L++F+ P +A E+ + E+ R+ E+ + AIE+N SCP+ + G A G D + + + + A+VPV+ K++PN+ DI A+ +G++G++ INT++ Sbjct: 4 LAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNKLGAIMAKAVTPEP-RLGNPTPRVAETASGMLNAIGLQNPGLEHV-LAHELPF---LEQFET-----PIIANVAGATED----DYVEVCSRIGESKAVKAIELNISCPN---VKHGGIAFGTDPEVAHRLTKAVKSVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLL 195
BLAST of CX045923 vs. ExPASy Swiss-Prot
Match: PYRD_BACTN (Dihydroorotate dehydrogenase OS=Bacteroides thetaiotaomicron GN=pyrD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 241 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 867 DLS+ + LQM NP + SG G G ++ K +L + N PR A +G + +G +N + D +E + K ++ + S +E+Y K A E+I+ +++ I AIE+N SCP+ ++ G A G + EV + A + K++PN+TDITE AR A SG++ VS INT++ Sbjct: 3 DLSVNIGELQMKNPVMTASGTFGYGEEFSDFIDIARIGGIIVKGTTLHKREG-NPYPRMAETPSGMLNA-----VGLQNKGV--DYFVEQIYPRIKDIQTNMIVNVS-GSAIEDYVKTA--EIINELDK--IPAIELNISCPN---VKQGGMAFGVSAKGASEVVKAVRAAYKKTLIVKLSPNVTDITEIARAAEESGADSVSLINTLL 195 The following BLAST results are available for this feature:
BLAST of CX045923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CX045923 ID=CX045923; Name=CX045923; organism=Citrus sinensis; type=EST; length=868bpback to top |