DN617867

Overview
NameDN617867
Unique NameDN617867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_MARMS (Hydroxyacylglutathione hydrolase OS=Marinomonas sp. (strain MWYL1) GN=gloB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 3
Query:  204 THQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            TH V++GD+  + + V  + + TP HT  H+ Y+    E E P + +GDTLF  GCG+  EG+ EQM  ++ + +  LP  T +Y  HEYT+ N  FAL++ P+N
Sbjct:   85 THPVDDGDRILVFSKVFTV-IATPGHTLDHLCYF---SEQETPILLSGDTLFKGGCGRIMEGTHEQMLAAM-IKISGLPNDTLIYGTHEYTLANYRFALSLEPNN 184          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRASB (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gloB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 3
Query:  210 QVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +V +GD   +G  +    L TP HT  H+SY        D AVF  DTLF  GCG+ FEG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTV   N
Sbjct:   92 RVGHGDVIKVG-ELLARVLETPGHTLDHVSYVFDA----DKAVFAADTLFSVGCGRVFEGTYPMMWDSL-LKLRALPDDFRLYCGHEYTASNVKFALTVDGDN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPA (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris GN=gloB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.825e-15
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 3
Query:  210 QVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +++ GD   +G  +    L TP HT  H+SY       +D A+F  DTLF  GCG+ FEG+   M++SL + L +LP   ++YCGHEYT  N+ FAL + P N
Sbjct:   92 RLQEGDVVRVG-DLTARVLETPGHTLDHLSYVFD----DDRALFAADTLFSIGCGRVFEGTYPMMWESL-LKLRALPDDFKLYCGHEYTASNVKFALGIEPDN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_NEIG1 (Hydroxyacylglutathione hydrolase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gloB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.825e-15
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  168 VYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            VYG S  +++  TH V  G +F+ G +  V    TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y +       LP+ T  Y  HEYT  NL FA  + P N
Sbjct:   73 VYGES--DIEAATHTVTAGTRFTFG-NGQVTVWATPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTVEQLYDNF-QRFNQLPEGTLFYPAHEYTAANLRFAAHIEPDN 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRAJA (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium japonicum GN=gloB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.825e-15
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 3
Query:  210 QVENGDKFSIGAHVNVLS--LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +V N D   +G   N+L+  + TP HT  HISY    ++     VF  DTLF  GCG+ FEG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTV P N
Sbjct:   92 RVANADVVKVG---NLLARVVETPGHTLDHISYVFDTEK----TVFAADTLFSIGCGRVFEGTYPMMWDSL-LKLRALPDDFKLYCGHEYTASNVKFALTVDPDN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_PSYIN (Hydroxyacylglutathione hydrolase OS=Psychromonas ingrahamii (strain 37) GN=gloB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  264 LHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +  P HT  H+++Y       D  +F GDTLF  GCG+ FEGS EQM++++   L  LP+ T+VYC HEYT  NL+FA  + P N
Sbjct:  108 MEVPGHTLDHVAFY------NDELLFCGDTLFSGGCGRVFEGSFEQMFKAVS-RLALLPENTKVYCAHEYTQNNLIFAHQIEPKN 185          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_NEIMB (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup B GN=gloB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 51/118 (43.22%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  168 VYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  + P N
Sbjct:   73 VYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLRFAAHIEPDN 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_NEIMA (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup A GN=gloB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 51/118 (43.22%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  168 VYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  + P N
Sbjct:   73 VYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLRFAAHIEPDN 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_NEIM0 (Hydroxyacylglutathione hydrolase OS=Neisseria meningitidis serogroup C (strain 053442) GN=gloB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 51/118 (43.22%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  168 VYGGSLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            VYG S  +++  TH V  G +F+ G   V V +  TP HT  H SY +   +G    VF GDTLF AGCG+ F G+ EQ+Y S       LP+ T  Y  HEYT  NL FA  + P N
Sbjct:   73 VYGES--DIEAATHTVTAGTQFTFGDGQVTVWA--TPGHTDRHTSYLLETSDGIH--VFCGDTLFSAGCGRVFTGTIEQLYDSF-QRFNRLPENTLFYPAHEYTAANLRFAAHIEPDN 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_NITHX (Hydroxyacylglutathione hydrolase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gloB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.113e-15
Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 3
Query:  210 QVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +V  GD   +G  +  + L TP HT  HISY       ++  VF  DTLF  GCG+  EG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTV P+N
Sbjct:   92 RVGQGDIVKVGTLLGRV-LETPGHTLDHISYVFD----DEKVVFAADTLFSIGCGRVIEGTYPMMWDSL-LKLRALPDDFRLYCGHEYTASNVKFALTVEPNN 188          
The following BLAST results are available for this feature:
BLAST of DN617867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GLO2_MARMS1.397e-1540.00Hydroxyacylglutathione hydrolase OS=Marinomonas sp... [more]
GLO2_BRASB1.397e-1544.66Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]
GLO2_RHOPA1.825e-1541.75Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_NEIG11.825e-1541.88Hydroxyacylglutathione hydrolase OS=Neisseria gono... [more]
GLO2_BRAJA1.825e-1544.76Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]
GLO2_PSYIN2.384e-1545.88Hydroxyacylglutathione hydrolase OS=Psychromonas i... [more]
GLO2_NEIMB2.384e-1543.22Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_NEIMA2.384e-1543.22Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_NEIM02.384e-1543.22Hydroxyacylglutathione hydrolase OS=Neisseria meni... [more]
GLO2_NITHX3.113e-1543.69Hydroxyacylglutathione hydrolase OS=Nitrobacter ha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01M18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617867 ID=DN617867; Name=DN617867; organism=Citrus sinensis; type=EST; length=526bp
AGACCACTCAAAGAAGCTCGCGGTTGTTGATCCAGTGGAGCCAGAGAAGA
TCATTGAGGCTGCCAAACAACATGGTGTCAATCTCACCACCGTTCTCACT
ACTCATCATCACTGGGACCATGCTGGNAGGGAACGAAAAGATGAAGGAGA
TGGTGCCTGGGATTAAGGTGTATGGTGGCTCACTTGATAATGTAAAGGGG
TGCACTCATCAAGTGGAAAATGGTGATAAGTTCTCAATTGGAGCTCATGT
CAATGTACTGTCTCTTCACACACCTTGCCATACCAAAGGTCACATAAGTT
ATTATGTGACTGGAAAAGAGGGAGAAGACCCAGCTGTTTTCACTGGAGAC
ACACTGTTTGTTGCTGGTTGTGGAAAATTTTTTGAAGGCTCGGCAGAACA
GATGTATCAATCCCTGTGCGTGACATTGGGCTCATTACCTCAGCCAACTC
AAGTTTACTGTGGCCATGAGTACACAGTGAAGAACCTACTATTTGCTCTT
ACTGTCTCACCAAGCAATGTGAAGCT
back to top