DN617854

Overview
NameDN617854
Unique NameDN617854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 3
Query:  213 RYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            ++ K Y +  E + R   F++N   I   N    +G +SY+LGLNK+AD    EF+    G         +    L            +P++ DWRE G V+ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  +
Sbjct:   34 QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKY 181          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.237e-19
Identity = 60/150 (40.00%), Postives = 79/150 (52.67%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F  F  ++ K Y S EE   RF  F  NL  I   N   ++++     G+NKFAD S +EF+ + L    N       +    AD L        P   DWR  G V+PVK+QG CGSCW+FSTTG++E  +  +  K +SLSEQ LVDC
Sbjct:   29 FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYL----NNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDC 173          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.934e-19
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:  192 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 611
            S+  F  +YG+ Y   +E   R   F +N  LI   N K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCS 162          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.934e-19
Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  204 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEF---------QRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            F  ++GK Y + EE   R + F   L  I+  N    KG ++Y L +N F+D + EE          +RH L      + TT     + ADV     DWR  G V+PVKDQG CGSCW FS   +LE A+    G  +SLSEQ LVDC+ ++
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPTTP----MAADV-----DWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSY 165          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18
Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH-KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F  F   Y + YES EE + R + F  N+  +R+   + L   + + G+ KF+D + EEF+   L          K    K   D+ P   DWR  G V+ VKDQG CGSCW FS TG++E  +    G  +SLSEQ+L+DC
Sbjct:  187 FKNFVITYNRTYESKEEARWRLSVFVNNM--VRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDC 326          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.524e-18
Identity = 58/155 (37.42%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL------------SYRLGLNKFADWSWEEFQRHRLGAAQNCSA--TTKGNH--KLTADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F  F ++Y K Y+  +E + R+  F  NL+ I S N + L            S + G+NKF+D + +E      G   N S   T   N   K   D+ LP+  DWR++  V+P+KDQG CGSCW F   G++E+ Y     K I LSEQQL+DC
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDC 211          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F  F   Y + YES EE + R   F++N+  IR+   + L   + + G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E  +    G  +SLSEQ+L+DC
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNM--IRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDC 304          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.599e-18
Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 3
Query:  147 ETSVLQVIG---QARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRH----------------------RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI-SLSEQQLVDCAQ 614
            E SV Q+ G     ++A  F  F  +Y + Y+ + E   ++  F  N   I+  N     Y++ +N+F+D+S ++F+ +                        G  +N   ++ G + L ADV PE  D+RE GIV   KDQG CGSCW F++ G++E  Y +   K I +LSEQ++VDC++
Sbjct:  218 EVSVAQIEGLFVNLKYASKFFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGAN-LLADV-PEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSK 397          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.599e-18
Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F +F  R+G+ Y S  E ++R   F +NL  I   N   + S + G+ +FAD +  E+ + R G  Q   A   G            LP+  DWR+   V+ VK+QG CGSCW FS TG++E  Y    G+    SEQ+L+DC
Sbjct:  308 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEY-KERTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDC 449          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.395e-18
Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  210 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK--------DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            R +  +   ++E   RF  F +N+  I   N K    Y+L LNKF D + +EF+    G+      + +G  K T   + E          DWR  G V+ VKDQG CGSCW FST  S+E       G+ +SLSEQ+LVDC  ++
Sbjct:   44 RTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSY 189          
The following BLAST results are available for this feature:
BLAST of DN617854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
CATL_SARPE3.070e-1937.84Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CYSP1_DICDI5.237e-1940.00Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CYSP3_HOMAM8.934e-1936.11Digestive cysteine proteinase 3 OS=Homarus america... [more]
CRUST_PANBO8.934e-1938.82Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATF_HUMAN1.167e-1838.03Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATV_NPVHZ1.524e-1837.42Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATF_MOUSE1.990e-1838.73Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP_PLAVS2.599e-1831.87Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CPR1_DROME2.599e-1836.36Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CYSP_HEMSP3.395e-1836.30Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617854 ID=DN617854; Name=DN617854; organism=Citrus sinensis; type=EST; length=630bp
AATCATTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTG
TTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGA
CTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGA
CCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCC
CGTTTTGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAA
GCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCA
ATTGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGG
AGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTC
TGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAA
CGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGT
CACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGC
TTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTG
TAGACTGTGCCCAAGCTTTCACAACCAGGG
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