CX045836

Overview
NameCX045836
Unique NameCX045836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.687e-27
Identity = 77/239 (32.22%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   15 EARKKIWLVDSKGLIVSSRKESLQHFK---------KPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*T 704
            +AR ++++VD  GL+       L   +         K W  E  P  SL+D ++  KPT+L+G SG    F+KEV++ M    E+P++F LSNPTS+ E T  +   W+ GQA+ A+GSPFDPV +NG+ +   Q NN++IFP      +   A RV DEM                   G + PP   I                + G A  +   + L    ES  + P+YR Y+ T
Sbjct:  324 QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKDWISEE-PNFSLVDVMRNAKPTVLIGVSGAPGLFSKEVIQEMHKHCERPIVFPLSNPTSRVEATPNDIIRWTNGQALVATGSPFDPVSHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVTDEMLMESSRALAECSPLAINGTGALLPPLEEIHSVSKRIAFAVAKKAIEQGHALEI-TDEALHQKIESYFWKPVYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.687e-27
Identity = 77/246 (31.30%), Postives = 119/246 (48.37%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+K+++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQKVFMVDRFGLLTDRMPNLLSFQTKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26
Identity = 81/241 (33.61%), Postives = 120/241 (49.79%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK---------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYA-ESCMYSPMYRSYR*T 704
            E+AR ++ +VD  GL++ +    L  F++  A + A I          SLLD V  +KPT+L+G SG    FT+E+V AM S  E+P+IF LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +G+ +   Q NN++IFP      + SGA  V D M                   G + P   +I                + GL+  LP   +L+  + E   + P YR Y+ T
Sbjct:  323 EQARSQVCMVDRWGLLLDNMPNLLP-FQQKLAQKCADISHWNNFSDNISLLDVVNNVKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS--LPASDELLMQSIEDNFWKPEYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26
Identity = 81/241 (33.61%), Postives = 120/241 (49.79%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK---------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYA-ESCMYSPMYRSYR*T 704
            E+AR ++ +VD  GL++ +    L  F++  A + A I          SLLD V  +KPT+L+G SG    FT+E+V AM S  E+P+IF LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  +G+ +   Q NN++IFP      + SGA  V D M                   G + P   +I                + GL+  LP   +L+  + E   + P YR Y+ T
Sbjct:  323 EQARSQVCMVDRWGLLLDNMPNLLP-FQQKLAQKCADISHWNNFSDNISLLDVVNNVKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS--LPASDELLMQSIEDNFWKPEYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26
Identity = 76/239 (31.80%), Postives = 111/239 (46.44%), Query Frame = 3
Query:   15 EARKKIWLVDSKGLIVSSRKESLQHFK---------KPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*T 704
            +AR ++++VD  GL+       L   +         K W  E  P  SL D +   KPT+L+G SG    F+KEV++ M    E+P++F LSNPTS+ E T  +   W+ GQA+ A+GSPFDPV +NG+ +   Q NN++IFP      +   A RV DEM                   G + PP   I                + G A  +   + L+   E   + P+YR Y+ T
Sbjct:  324 QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKEWVSEE-PNYSLFDVMHNAKPTVLIGVSGAPGLFSKEVIQEMHKHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFDPVTHNGQTYPIAQCNNSFIFPGIGLGVLAIKATRVSDEMLRESSRALSECSPLAINGSGALLPPLEEIHTVSKKIAFAVAKKAIEQGYALEI-TDEALMQKIEQYFWKPVYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.482e-26
Identity = 74/240 (30.83%), Postives = 116/240 (48.33%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK---------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*T 704
            E+AR ++++VD  GL+       L  F++    +H+  K         SLLD ++  KPT+L+G SG    F++EV+E M    ++P++F LSNPTS+ E T  +   W+ G+A+ A+GSPFDPV + G+ +   Q NN+YIFP      +   A RV DEM                  +G + PP   I                + G+A  +   + L    +   + P+YR Y+ T
Sbjct:  323 EKARSQVYMVDRWGLLQEGMPNLLD-FQQRLVQKHSNTKEWENEGNGFSLLDVMRNAKPTVLIGVSGAPGLFSQEVIEEMHKHCKRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFDPVVHEGRTYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGRGALLPPLEEIHLVSKKIAFAVAKKAIEQGVALEI-TDEALNDAIDQAFWQPVYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.482e-26
Identity = 77/246 (31.30%), Postives = 118/246 (47.97%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSS-------------RKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+                ++E+LQH    W  E + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  K++   Q NNAYIFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDQMPNLLSFQTKLVQKRENLQH----WDSE-SEVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFAPVAWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKYSPLVLNGEGLVLPELKDIQTVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDENFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.935e-26
Identity = 76/241 (31.54%), Postives = 117/241 (48.55%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAHEHAP-------IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            EEAR+++++VD  GL+       L    K     EH         + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T +   +W+ G+A+ A+GSPF PV   GK +   Q NN+YIFP      I SGA RV DEM               +  +G + P   +I+               + G+A +      L + +++  + P YR+YR T +
Sbjct:  326 EEARQRVFMVDRFGLLTDGMPNLLPFQNKLVQKREHLQGWDTTNDVLSLLDVVRNVKPNILIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFAPVTLKGKQYAIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAKHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVKTSAEALLQAISDN-FWLPEYRNYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.528e-26
Identity = 66/161 (40.99%), Postives = 92/161 (57.14%), Query Frame = 3
Query:   15 EARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEM 470
            +AR ++++VD  GLI  ++   L   +K          W +    I SLLD VK  KPT+L+G SG    FT+EV+  +A   E+P++  LSNPTS+ E    +   W+ G+A+ A+GSPF PV Y GK++   Q NN+YIFP      I SGA RV D M
Sbjct:  328 QARARVYMVDRFGLITENQPNLLDFQRKLAQKAEVVSDWGNVEEVI-SLLDVVKNAKPTVLIGVSGQPGLFTEEVIRTLAENCERPIVMPLSNPTSRVEALPSDVIQWTNGRALIATGSPFAPVNYQGKLYNISQCNNSYIFPGIGLGVIASGAKRVTDNM 487          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 78/240 (32.50%), Postives = 120/240 (50.00%), Query Frame = 3
Query:   15 EARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYA-ESCMYSPMYRSYR*T 704
            +AR ++++VD  GL+  +    L   +K          W  E+  I SLLD +   KPT+L+G SG    F++E+++AM     +P++F LSNPTS+ E T ++   W+ GQA+ A+GSPF+PV  NG+ F   Q NN+YIFP      + +GA RV DEM                  +G + PP   I                + G A  LP   +L++ + E+  ++  YR Y+ T
Sbjct:  324 QARSQVFMVDRWGLLQDNMPNLLNFQEKLAQKTQAVKDWTIENGNI-SLLDVMNNAKPTVLIGVSGAPGLFSEEIIKAMHQHCPRPIVFPLSNPTSRVEATPKDVLHWTNGQALVATGSPFEPVALNGETFEIAQCNNSYIFPGIGLGVLSAGAKRVSDEMLMASSRALAECSPLALNGEGPLLPPLEEIHQVSKHIAFAVAKVAVEQGHA--LPCTDELLAQSIENNFWTAEYRRYKRT 560          
The following BLAST results are available for this feature:
BLAST of CX045836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_VIBFM8.687e-2732.22NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SALAR8.687e-2731.30NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_SHESR1.135e-2633.61NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM1.135e-2633.61NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_ALISL1.135e-2631.80NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]
MAO1_VIBPA1.482e-2630.83NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_CITK81.482e-2631.30NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_KLEP31.935e-2631.54NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_ACIAD2.528e-2640.99NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_SHEWM3.301e-2632.50NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_4C07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4C07-E14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045836 ID=CX045836; Name=CX045836; organism=Citrus sinensis; type=EST; length=843bp
AAGCTCCAATTGAAGAGGCCCGTAAGAAGATTTGGCTGGTAGATTCAAAG
GGACTGATTGTGAGCTCTCGTAAGGAGTCACTTCAGCACTTCAAGAAGCC
ATGGGCTCATGAGCATGCACCTATCAAATCATTATTAGATGCTGTCAAGG
CAATCAAGCCAACAATGTTGATGGGAACATCTGGAGTAGGAAAGACTTTT
ACAAAGGAGGTGGTCGAGGCTATGGCATCCTTTAATGAGAAACCCGTTAT
TTTTGCTCTATCCAATCCTACCTCACAGTCTGAGTGTACAGCGGAAGAAG
CTTATACATGGAGTAAGGGTCAAGCAATCTTTGCTAGTGGAAGCCCATTT
GACCCTGTTGAATACAATGGGAAAGTTTTTGTGCCTGGCCAGGGAAACAA
TGCTTATATATTCCCCGGATTGGGTCTGGGTTTGATAATATCCGGTGCAA
TTCGTGTCCGCGATGAGATGCTTCTAGCAGCCTCGGAAGCTTTGGCAGCG
CAAGTGACACAAGAGCACTTCGATAAGGGATTGATATACCCACCATTCAC
TAATATCAGAAAGATCTCTGCCCACATTGCTGCTAAAGTTGCTGCCAAGG
CATATGACCTTGGTCTGGCTTCCCGTCTTCCTCGTCCTAAGGATCTAGTG
AGTTACGCTGAGAGCTGCATGTACAGCCCAATGTACCGAAGCTACCGTTG
AACTGAACTCCATGTGGAAGTGTGCGATTATAGTCTGCATTCTGCAATCT
GCTGCGAACCTAGTTATATTAATTTTTGTTCTTTTTAATATTTCTTTGTC
GCCTGTTTATCAGTTTAAATTTAGTTTTCTATTTTGGTTTGTT
back to top