CX045836

Overview
NameCX045836
Unique NameCX045836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIVWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 3 
Query:   12 EEARKKIWLVDSKGLIVS-------------SRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            + AR+ +++VD  GL+                + ++LQH    W  E+  + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF PV +  KV+   Q NNAYIFP      I SGA R+ DEM               +  +GL+ P   +I+                 G+A +    + L    +   + P YR YR T +
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEN-DVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYRRTSI 565
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.311e-26
Identity = 80/240 (33.33%), Postives = 122/240 (50.83%), Query Frame = 3 
Query:   15 EARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYA-ESCMYSPMYRSYR*T 704
            +ARK++++VD  G++ S+    L   +K          W +    I SLLD V   KPT+L+G SG    FT+E+++AM S  ++P++F LSNPTS+ E T ++   W++GQA+ A+GSPF+PV  +   +   Q NN+YIFP      + SGA RV D M                  +G + P   +I                + G A  LP   +L++YA E   ++  YRSY+ T
Sbjct:  324 QARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDITSWDNFSDNI-SLLDVVNNAKPTVLIGVSGAPGLFTEEIIKAMHSHCKRPIVFPLSNPTSRVEATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHA--LPTTNELLTYAIEDNFWTAEYRSYKRT 560
[Close]
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHEHH (NAD-dependent malic enzyme OS=Shewanella halifaxensis (strain HAW-EB4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.311e-26
Identity = 79/240 (32.92%), Postives = 123/240 (51.25%), Query Frame = 3 
Query:   15 EARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK---------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYA-ESCMYSPMYRSYR*T 704
            +ARK++++VD  G++  S   +L  F++  A +   +          SLLD V   KPT+L+G SG    FT+E+++AM S   +P++F LSNPTS+ E T ++   W++G+A+ A+GSPF+PV  +   +   Q NN+YIFP      + SGA RV D M                  +G + P   +I                + G A  LP  K+L++YA E   ++  YRSY+ T
Sbjct:  324 QARKQVFMVDRWGML-QSNMPNLLPFQQKLAQQCDDLTNWDNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIIKAMHSHCPRPIVFPLSNPTSRVEATPKDILHWTQGKALVATGSPFEPVVIDDTTYEIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHLVSKRIAFAVARVAIEEGHA--LPTTKELLTYAIEDNFWTAEYRSYKRT 560
The following BLAST results are available for this feature:
BLAST of CX045836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALTY3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALHS3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella heidelber... [more]
MAO1_SALCH3.301e-2630.89NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_SALA43.301e-2630.89NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO1_SHEPA4.311e-2633.33NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]
MAO1_SHEHH4.311e-2632.92NAD-dependent malic enzyme OS=Shewanella halifaxen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_4C07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4C07-E14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045836 ID=CX045836; Name=CX045836; organism=Citrus sinensis; type=EST; length=843bp
AAGCTCCAATTGAAGAGGCCCGTAAGAAGATTTGGCTGGTAGATTCAAAG
GGACTGATTGTGAGCTCTCGTAAGGAGTCACTTCAGCACTTCAAGAAGCC
ATGGGCTCATGAGCATGCACCTATCAAATCATTATTAGATGCTGTCAAGG
CAATCAAGCCAACAATGTTGATGGGAACATCTGGAGTAGGAAAGACTTTT
ACAAAGGAGGTGGTCGAGGCTATGGCATCCTTTAATGAGAAACCCGTTAT
TTTTGCTCTATCCAATCCTACCTCACAGTCTGAGTGTACAGCGGAAGAAG
CTTATACATGGAGTAAGGGTCAAGCAATCTTTGCTAGTGGAAGCCCATTT
GACCCTGTTGAATACAATGGGAAAGTTTTTGTGCCTGGCCAGGGAAACAA
TGCTTATATATTCCCCGGATTGGGTCTGGGTTTGATAATATCCGGTGCAA
TTCGTGTCCGCGATGAGATGCTTCTAGCAGCCTCGGAAGCTTTGGCAGCG
CAAGTGACACAAGAGCACTTCGATAAGGGATTGATATACCCACCATTCAC
TAATATCAGAAAGATCTCTGCCCACATTGCTGCTAAAGTTGCTGCCAAGG
CATATGACCTTGGTCTGGCTTCCCGTCTTCCTCGTCCTAAGGATCTAGTG
AGTTACGCTGAGAGCTGCATGTACAGCCCAATGTACCGAAGCTACCGTTG
AACTGAACTCCATGTGGAAGTGTGCGATTATAGTCTGCATTCTGCAATCT
GCTGCGAACCTAGTTATATTAATTTTTGTTCTTTTTAATATTTCTTTGTC
GCCTGTTTATCAGTTTAAATTTAGTTTTCTATTTTGGTTTGTT
back to top