CX045836

Overview
NameCX045836
Unique NameCX045836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.767e-25
Identity = 78/241 (32.37%), Postives = 113/241 (46.89%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK---------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYA-ESCMYSPMYRSYR*T 704
            ++AR ++++VD  GL+       L  F++    +H+            SLLD VK  KPT+L+G SG    FT+EV++ M     +P++F LSNPTS+ E    +   W+ G A+ A+GSPFDPV + GK +   Q NN+YIFP      +   A RV DEM                  KG + PP   I                + G+A  L    D +  A E   + P+YR Y+ T
Sbjct:  323 KKARSQVFMVDRWGLLQEGMPNLLD-FQQRLVQKHSVTAKWETEANGFSLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVA--LEIADDALQVAIEQHFWQPVYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25
Identity = 64/162 (39.51%), Postives = 97/162 (59.88%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK---------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEM 470
            E+AR ++++VD  GL+      +L  F++  A +   I+         SLLD V   KPT+L+G SG    F++E+++AM S   +P++F LSNPTS+ E T ++   W+KGQA+ A+GSPF+PV    + F   Q NN+YIFP      + +GA RV +EM
Sbjct:  323 EQARAQVFMVDRWGLL-QDNMPTLLPFQQKLAQKCDDIEGWDNFSENISLLDVVNNAKPTVLIGVSGAPGVFSEEIIKAMHSHCPRPIVFPLSNPTSRVEATPKDLLHWTKGQALVATGSPFEPVVVEDETFEIAQCNNSYIFPGIGLGVLAAGAKRVSNEM 483          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHISS (NAD-dependent malic enzyme OS=Shigella sonnei (strain Ss046) GN=sfcA PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 78/240 (32.50%), Postives = 115/240 (47.92%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK--------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLP-RPKDLVSYAESCMYSPMYRSYR*T 704
            E+AR+++++VD  GL+  S  E LQ F+ P   + + I+         L   VK  + T+L G SG    FT+EVVEA+ +  E P++  LSNPTS+ E T +E   WS+G+AI A+GSPF    + G+ +   Q NN+YIFP      + + A  + D M             +     G I PP   IR               +  LA  LP   ++L    ++  + P YR YR T
Sbjct:  322 EQARRQVFMVDRYGLLTDSMTE-LQKFQTPLVQKESDIEHWDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLA--LPVTAENLERRLKANFWLPKYRDYRRT 558          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 ETARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
The following BLAST results are available for this feature:
BLAST of CX045836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO11_VIBVY4.767e-2532.37NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_SHESH6.226e-2539.51NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_SHISS1.062e-2430.17NAD-dependent malic enzyme OS=Shigella sonnei (str... [more]
MAO1_SHIFL1.062e-2430.17NAD-dependent malic enzyme OS=Shigella flexneri GN... [more]
MAO1_SHIF81.062e-2430.17NAD-dependent malic enzyme OS=Shigella flexneri se... [more]
MAO1_SHIBS1.062e-2430.17NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHIB31.062e-2430.17NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_PSYCK1.062e-2432.50NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_ESCF31.062e-2430.17NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ECOSM1.062e-2430.17NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_4C07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4C07-E14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045836 ID=CX045836; Name=CX045836; organism=Citrus sinensis; type=EST; length=843bp
AAGCTCCAATTGAAGAGGCCCGTAAGAAGATTTGGCTGGTAGATTCAAAG
GGACTGATTGTGAGCTCTCGTAAGGAGTCACTTCAGCACTTCAAGAAGCC
ATGGGCTCATGAGCATGCACCTATCAAATCATTATTAGATGCTGTCAAGG
CAATCAAGCCAACAATGTTGATGGGAACATCTGGAGTAGGAAAGACTTTT
ACAAAGGAGGTGGTCGAGGCTATGGCATCCTTTAATGAGAAACCCGTTAT
TTTTGCTCTATCCAATCCTACCTCACAGTCTGAGTGTACAGCGGAAGAAG
CTTATACATGGAGTAAGGGTCAAGCAATCTTTGCTAGTGGAAGCCCATTT
GACCCTGTTGAATACAATGGGAAAGTTTTTGTGCCTGGCCAGGGAAACAA
TGCTTATATATTCCCCGGATTGGGTCTGGGTTTGATAATATCCGGTGCAA
TTCGTGTCCGCGATGAGATGCTTCTAGCAGCCTCGGAAGCTTTGGCAGCG
CAAGTGACACAAGAGCACTTCGATAAGGGATTGATATACCCACCATTCAC
TAATATCAGAAAGATCTCTGCCCACATTGCTGCTAAAGTTGCTGCCAAGG
CATATGACCTTGGTCTGGCTTCCCGTCTTCCTCGTCCTAAGGATCTAGTG
AGTTACGCTGAGAGCTGCATGTACAGCCCAATGTACCGAAGCTACCGTTG
AACTGAACTCCATGTGGAAGTGTGCGATTATAGTCTGCATTCTGCAATCT
GCTGCGAACCTAGTTATATTAATTTTTGTTCTTTTTAATATTTCTTTGTC
GCCTGTTTATCAGTTTAAATTTAGTTTTCTATTTTGGTTTGTT
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