CX045836

Overview
NameCX045836
Unique NameCX045836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*TEL 710
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM                  +GL+ P   +I+                 G+A +    + L    +   +   YR YR T +
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYRRTSI 565          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 73/240 (30.42%), Postives = 116/240 (48.33%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLI-------VSSRKESLQHFK--KPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR*T 704
            E+AR ++++VD  GL+       +  ++  +Q F   K W +E     SLLD +   KPT+L+G SG    F++EV++ M    ++P++F LSNPTS+ E T  +   W+ G+A+ A+GSPF+PV + G+ +   Q NN+YIFP      +   A RV DEM                   G + PP   I                + G+A  +   + L    +   + P+YR Y+ T
Sbjct:  323 EKARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKFDNTKKWENEGNGF-SLLDVMHNAKPTILIGVSGAPGLFSEEVIKEMHKHCKRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFEPVVHEGRSYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGNGALLPPLEEIHLVSKKIAFAVAKKAIEQGVALEI-TDEALNDAIDQAFWQPVYRRYKRT 560          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 69/191 (36.13%), Postives = 98/191 (51.31%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKS--------LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIR 560
            E+ARK++++VD  GL+  S  E LQ F+ P   + + I+S        L   VK  K T+L G SG    FT+EV+EA+    E P++  LSNPTS+ E T +E  +WS+G+AI A+GSPF    +  + F   Q NN+YIFP      + + A  + D M             +     G I PP   IR
Sbjct:  322 EQARKQVFMVDRYGLLTDSMTE-LQKFQAPLVQKESAIESWDKSQKLGLAQVVKQAKITVLFGVSGQKGLFTREVIEALCVNTEHPIVLPLSNPTSRVEATPQEVTSWSRGKAIVATGSPFPNTTFEDQSFEISQCNNSYIFPGIGLGVLAAHATGISDNMLMSASQALADISMEYEKAPGAILPPIKFIR 511          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEM 470
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEM 470
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CX045836 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   12 EEARKKIWLVDSKGLIVSSRKESLQHFKK---------PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPXXXXXXIISGAIRVRDEM 470
            E AR+K+++VD  GL+       L    K          W  + + + SLLD V+ +KP +L+G SG    FT+E++  M     +P++  LSNPTS+ E T ++   W++G A+ A+GSPF+PV +  K++   Q NNA+IFP      I SGA R+ DEM
Sbjct:  326 EAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTD-SDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
The following BLAST results are available for this feature:
BLAST of CX045836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECOLU1.062e-2430.17NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECO8A1.062e-2430.17NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]
MAO1_ECO811.062e-2430.17NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO551.062e-2430.17NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO241.062e-2430.17NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAO1_VIBHB1.387e-2430.42NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO1_PSYA21.387e-2436.13NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_ECOUT1.387e-2437.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLI1.387e-2437.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC1.387e-2437.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_4C07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4C07-E14-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045836 ID=CX045836; Name=CX045836; organism=Citrus sinensis; type=EST; length=843bp
AAGCTCCAATTGAAGAGGCCCGTAAGAAGATTTGGCTGGTAGATTCAAAG
GGACTGATTGTGAGCTCTCGTAAGGAGTCACTTCAGCACTTCAAGAAGCC
ATGGGCTCATGAGCATGCACCTATCAAATCATTATTAGATGCTGTCAAGG
CAATCAAGCCAACAATGTTGATGGGAACATCTGGAGTAGGAAAGACTTTT
ACAAAGGAGGTGGTCGAGGCTATGGCATCCTTTAATGAGAAACCCGTTAT
TTTTGCTCTATCCAATCCTACCTCACAGTCTGAGTGTACAGCGGAAGAAG
CTTATACATGGAGTAAGGGTCAAGCAATCTTTGCTAGTGGAAGCCCATTT
GACCCTGTTGAATACAATGGGAAAGTTTTTGTGCCTGGCCAGGGAAACAA
TGCTTATATATTCCCCGGATTGGGTCTGGGTTTGATAATATCCGGTGCAA
TTCGTGTCCGCGATGAGATGCTTCTAGCAGCCTCGGAAGCTTTGGCAGCG
CAAGTGACACAAGAGCACTTCGATAAGGGATTGATATACCCACCATTCAC
TAATATCAGAAAGATCTCTGCCCACATTGCTGCTAAAGTTGCTGCCAAGG
CATATGACCTTGGTCTGGCTTCCCGTCTTCCTCGTCCTAAGGATCTAGTG
AGTTACGCTGAGAGCTGCATGTACAGCCCAATGTACCGAAGCTACCGTTG
AACTGAACTCCATGTGGAAGTGTGCGATTATAGTCTGCATTCTGCAATCT
GCTGCGAACCTAGTTATATTAATTTTTGTTCTTTTTAATATTTCTTTGTC
GCCTGTTTATCAGTTTAAATTTAGTTTTCTATTTTGGTTTGTT
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