DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -1
Query:  177 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVK--GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 491
            D ++ GF +P  +++LVN W +  + + W NP  F PERFL  +  V+  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+     G     ID  EK G
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSKIDTSEKGG 486          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 46/125 (36.80%), Postives = 69/125 (55.20%), Query Frame = -1
Query:  132 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVK--GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEK---FGLTLQKARPLRALPIA 491
            D ++ GF +P  +++LVN W +  + +LW  P  F PERFL  +  V+  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+     G     ID  EK   F L + K   + A P A
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG--QSKIDTSEKGGQFSLHILKHSTIVAKPRA 504          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = -1
Query:  177 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 491
            D ++AG+ +P  +++LVN W +  + + W+ P  F PERFL  +  ++  G +F+ IPFG GRR CPG+ LA+ +L +++G L+ +F+     G     ID  EK G
Sbjct:  383 DAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPG--QSKIDTAEKGG 487          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = -1
Query:  141 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 491
            DT++ G+ VP G+++ +N +    D   W+ P  + PERFL           + + FGAG+R+C G   A  M  + +G L+  F+WKL DG         + +GLT QK  PL A+
Sbjct:  391 DTQIGGYHVPAGSEIAINIYGCNMDKKRWERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKLRDGEEENV----DTYGLTSQKLYPLMAI 503          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.337e-14
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = -1
Query:  168 TEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTL 488
            T + GF +P G  VL+N W++ RD ++W+ P  F P RFL  D     +    IPFG G+R+C G  LA   L+LM  SL+ +F + L +G       M  +FGLTL
Sbjct:  415 TVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRFLD-DQGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEGSEKPV--MTGRFGLTL 518          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.337e-14
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = -1
Query:  141 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 491
            DT V G+ +P G+ VL++   IGR+ S+WD P+ F PER L  +  +D+   +  +I F AGRR C G+ +   M Y++L  LI  F W    G     ID+ E     L  A+PL A+
Sbjct:  402 DTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPG--KNKIDISESKN-DLFMAKPLYAV 517          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = -1
Query:  177 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 491
            D +++GF +P  +++LVN W +  + + W  P  F PERFL  +  ++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+     G     ID  EK G
Sbjct:  381 DAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSKIDTAEKGG 485          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_BALAC (Cytochrome P450 1A1 OS=Balaenoptera acutorostrata GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = -1
Query:  159 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDV-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKA 491
            DT + GF +P G  V VN W I  D  LWD+P +F PERFL  D  + K  + ++I FG G+R C G  +A   ++L L  L+   ++++  GV    +DM   +GLT++ A
Sbjct:  397 DTSLNGFYIPKGRCVFVNQWQINHDQKLWDDPSAFWPERFLTADGTINKALSEKVILFGLGKRKCIGETIARWEVFLFLAILLQQVEFRVTPGV---KVDMTPVYGLTMKHA 505          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  177 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVK--GRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 491
            D ++ GF +P  +++LVN W +  +   W  P  F PERFL  +  V+  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+     G     ID +EK G
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG--QSKIDTDEKGG 486          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = -1
Query:  177 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 491
            D ++AG+ +P  +++LVN W +  + + W +P  F PERFL  +  ++  G +F  IPFG GRR CPG+ LA+ +L + +G ++ +F+     G     ID  EK G
Sbjct:  382 DAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPG--QSKIDTSEKGG 486          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
TCMO_POPTM5.999e-1539.25Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_PEA5.999e-1536.80Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_PETCR1.023e-1437.38Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
KO1_ARATH1.023e-1434.19Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
CP2U1_MOUSE1.337e-1440.19Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]
C79A2_ARATH1.337e-1437.82Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
TCMO_CICAR2.280e-1437.38Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
CP1A1_BALAC2.280e-1438.39Cytochrome P450 1A1 OS=Balaenoptera acutorostrata ... [more]
TCMO_HELTU2.977e-1437.38Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_RUTGR3.889e-1436.45Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
back to top