DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2U1_BOVIN (Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = -1
Query:  168 TEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTL 488
            T + GF +P G  +L N W++ RD ++W+ P  F P+RFL  D     +    IPFG G+R+C G  LA   L+LM  SL+ SF + L     P    +  K+GLTL
Sbjct:  429 TVLQGFTIPKGTIILPNLWSVHRDPAIWEKPNDFYPDRFLD-DQGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFVLPKDSKP---ILTGKYGLTL 531          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = -1
Query:  165 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD-LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQ 494
            AD+ +  + +P G +V++N WAI  D   W NP +F P RFL  D   V   +   +PFGAG R+C G  LA   L+L    ++  F  ++  G  P   D E KFG+ LQ
Sbjct:  380 ADSSIGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLDEDGKYVCSSSESYLPFGAGTRVCLGEMLARMELFLFTSWILQRFTVQVPPGYPPP--DKEGKFGIVLQ 488          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  144 TEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL--GLDLDVKG-RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTP--QTIDMEEKFGLTLQKARPLRA 488
            T + G+ +P  A V V T AI  D   W NP  F PERF+  G + D+ G    +++PFG GRRICPGL +A   ++LM+  ++  F+W    G  P  + +D   K+  T+     LRA
Sbjct:  386 TTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEW----GAYPPEKKMDFTGKWEFTVVMKESLRA 501          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 36/120 (30.00%), Postives = 67/120 (55.83%), Query Frame = -1
Query:  138 DTEVAGFMVPNGAQVLVNTWAIGRDASLWD-NPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG-VTPQTIDMEEKFGLTLQKARPLRALP 491
            D ++ G+ +  G  V++N WA+ R+ ++W  +   + PER    +   +  + + +PFGAGRR+CPG+  ++ +  L L +L+  F+W+L+ G V     D+ E  G+ + +  PL   P
Sbjct:  374 DVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIVFP 493          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIP-FGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + GF +P G  V VN W +  D  LW +P  F PERFL     +  R  E +  FG G+R C G  +    ++L L  L+   ++K+  G   + +DM   +GLTL+ AR
Sbjct:  397 DTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPNEFRPERFLTPSGTLDKRLSEKVTLFGLGKRKCIGETIGRSEVFLFLAILLQQIEFKVSPG---EKVDMTPTYGLTLKHAR 506          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_MACMU (Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  159 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDV-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKA 491
            DT + GF +P G  V VN W I  D  LW NP  F+PERF+  D  + K  + ++I FG G+R C G  +A   ++L L  L+   ++ +  GV    +DM   +GLT++ A
Sbjct:  393 DTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFITPDGAIDKVLSEKVILFGLGKRKCIGETIARWEVFLFLAILLQRVEFSVPPGV---KVDMTPIYGLTMKHA 501          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_MACFA (Cytochrome P450 1A1 OS=Macaca fascicularis GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  159 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDV-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKA 491
            DT + GF +P G  V VN W I  D  LW NP  F+PERF+  D  + K  + ++I FG G+R C G  +A   ++L L  L+   ++ +  GV    +DM   +GLT++ A
Sbjct:  393 DTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFITPDGAIDKVLSEKVILFGLGKRKCIGETIARWEVFLFLAILLQRVEFSVPPGV---KVDMTPIYGLTMKHA 501          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = -1
Query:  174 VLVNTWAIGRDASLWDNPYS--FVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLE-------DGVTPQTIDMEEKFGL 449
            V +N WAI RD   W  PY+  F PER L L L+ +G++F  IPFG+GRR+CP +  A  ++ + L + +  F+W++E       DG+    +++  KF L
Sbjct:  378 VFINAWAIHRDTEKW-GPYAEEFKPERHLDLPLNFQGQDFNFIPFGSGRRLCPDIDFATMLIEVGLANFVYRFNWRVETRPLGDDDGLKQTGMEVCHKFPL 477          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.334e-13
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  159 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDV-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKA 491
            DT + GF +P G  V VN W I  D  LW NP  F+PERFL  D  + K  + ++I FG G+R C G  +A   ++L L  L+   ++ +  GV    +DM   +GLT++ A
Sbjct:  393 DTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGV---KVDMTPIYGLTMKHA 501          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.578e-13
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = -1
Query:  144 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERF-LGL-DLDVKG-RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRA 485
            ++ G+ +P G  V +    I  D +LW  P  F P+RF LG  D D+ G    ++IPFG GRRICPGL +A   + LML  L+  F+W   +      +D  EK   T+     LRA
Sbjct:  392 KLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENT---RVDFTEKLEFTVVMKNTLRA 505          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CP2U1_BOVIN1.930e-1339.25Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 S... [more]
CP17A_SQUAC1.930e-1337.84Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
C77A3_SOYBN1.930e-1337.50Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
C71AR_ARATH1.930e-1330.00Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_MOUSE4.299e-1336.28Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP1A1_MACMU5.615e-1337.50Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE... [more]
CP1A1_MACFA5.615e-1337.50Cytochrome P450 1A1 OS=Macaca fascicularis GN=CYP1... [more]
C71AS_ARATH5.615e-1337.62Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
CP1A1_HUMAN7.334e-1338.39Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
C77A2_SOLME9.578e-1337.61Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
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