DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = -1
Query:  141 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 485
            E+ GF +     ++VN +A+ RD + W++P  F PERF  L  + + R  + I FG+GRR CPG  LA   +   +G+++  FD  ++       + M+E  GL L  A PL  +
Sbjct:  385 EMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERF--LRQEEERRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKG----DKVKMDEVGGLNLTMAHPLECI 493          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2DE_BOVIN (Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFE---LIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D EV GF +P G  ++ N  ++ +D ++W+ P+ F PE F    LD +GR  +    IPF AGRR C G PLA   L+L   SL+  F + +  G
Sbjct:  384 DIEVQGFHIPKGTTLITNLSSVLKDETVWEKPFRFHPEHF----LDAQGRFVKQEAFIPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPAG 474          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11
Identity = 35/106 (33.02%), Postives = 54/106 (50.94%), Query Frame = -1
Query:  186 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGL---DLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEE 494
            ADT +AG+ VP G+ V+++   +GR+  +WD P  F P+R L     D+ +   +   I F  GRR C    L   M  ++ G L+  F W    GV  + +D+ E
Sbjct:  426 ADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAASDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGV--EAVDLSE 529          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2DP_PIG (Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D25 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGR---NFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D EV GF++P G  ++ N  ++ +D ++W  P+ F PE F    LD +GR       +PF AGRR C G PLA   L+L   +L+ +F + +  G
Sbjct:  384 DIEVQGFLIPKGTTLITNLTSVLKDETVWKKPFRFYPEHF----LDAQGRFTKQEAFMPFSAGRRSCLGEPLARMELFLFFTTLLQAFSFSVPTG 474          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = -1
Query:  162 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG--LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQK 494
            +DT VAG+ +P G+QVL++ + +GR+  +W +P  F PER L    ++ +   +   I F  G+R C    L   +  +ML  L+  F WKL +  T   + ME    + L K
Sbjct:  411 SDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVEL-MESSHDMFLAK 522          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_STECH (Cytochrome P450 1A1 OS=Stenotomus chrysops GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11
Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD-LDV-KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I  DA LW +P SF P+RFL  D  +V K    +++ FG G+R C G  +A   ++L L  L+ +  +    G   + +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQINHDAELWKDPSSFNPDRFLNADGTEVNKLEGEKMMVFGMGKRRCIGEVIARSEVFLFLAILVQNLRFHSMPG---EPLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_SPAAU (Cytochrome P450 1A1 OS=Sparus aurata GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11
Identity = 38/115 (33.04%), Postives = 63/115 (54.78%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I  D  LW +P SF P+RFL   G +L+ K    +++ FG G+R C G  +A   ++L L  L+ +  +  + G   + +DM  ++GLT++  R
Sbjct:  398 DTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLNTDGTELN-KLEGEKMMVFGLGKRRCIGEVIARNEVFLFLAILVQNLRFHAKPG---EPLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_OPSTA (Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            +T + G+ +P    V +N W I  D  LW +P+SF PERFL  D     R    +++ FG G+R C G  +A   ++L L  +I    + +  G   + +DM  ++GLT++  R
Sbjct:  398 NTSLNGYFIPKDTCVFINQWQINHDPELWKDPFSFNPERFLSADGTELNRLEGEKVMLFGLGKRRCIGEVIARNEVFLFLAIIIQRLQFHMLPG---EPLDMTPEYGLTMKHKR 508          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_MESAU (Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP1A1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11
Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL----GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + GF +P G  V VN W I  +  LW +P  F PERFL     LD  + G+   +  FG G+R C G  +    ++L L  L+   ++ +  G   + +DM   +GLTL+ AR
Sbjct:  397 DTSLCGFYIPKGHCVFVNQWQINHNQELWGDPNKFRPERFLTSSGTLDKVLSGK---VTLFGLGKRKCIGETIGRLEVFLFLAILLQQIEFTVSPG---EKVDMTPIYGLTLKHAR 506          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2DG_CAVPO (Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFE---LIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            DTEV GF++P G  +  N  ++ +D ++W+ P  F P  F    LD +GR  +    +PF AG RIC G PLA   L+L   SL+  F + + +G
Sbjct:  384 DTEVQGFLIPKGTMLFTNLSSVLKDETVWEKPLHFHPGHF----LDAEGRFVKREAFMPFSAGPRICLGEPLARMELFLFFTSLLQRFSFSVPEG 474          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
C75AK_ARATH8.108e-1233.91Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
CP2DE_BOVIN1.059e-1138.95Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2... [more]
C79A1_SORBI1.059e-1133.02Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
CP2DP_PIG1.383e-1136.84Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D... [more]
C79B2_ARATH1.383e-1132.74Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
CP1A1_STECH1.806e-1134.21Cytochrome P450 1A1 OS=Stenotomus chrysops GN=cyp1... [more]
CP1A1_SPAAU1.806e-1133.04Cytochrome P450 1A1 OS=Sparus aurata GN=cyp1a1 PE=... [more]
CP1A1_OPSTA1.806e-1132.46Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 ... [more]
CP1A1_MESAU1.806e-1135.34Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP... [more]
CP2DG_CAVPO2.359e-1137.89Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
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