DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A2_CANFA (Cytochrome P450 1A2 OS=Canis familiaris GN=CYP1A2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDV--KGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + GF +P    V +N W +  D  +W +P++F PERFL  D     K  + +++ FG G+R C G  LA   ++L L  L+   ++ +  GV    +D+   +GLT++  R
Sbjct:  389 DTTLKGFYIPKECCVFINQWQVNHDQQVWGDPFAFRPERFLTADGTTINKTLSEKVMLFGMGKRRCIGEVLAKWEIFLFLAILLQRLEFSVPAGV---KVDLTPIYGLTMKHTR 499          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A2_CALJA (Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + GF +P    V +N W +  D  LW +P  F PERFL   G  L+ K  + +++ FG G+R C G  L    ++L L  L+   ++ +  GV    ID+   +GLT++ AR
Sbjct:  393 DTTLKGFYIPKECCVFINQWQVNHDPQLWGDPSEFRPERFLTAKGTALN-KPLSEKILLFGLGKRRCIGEVLGKWEVFLFLAILLQQLEFSVPPGV---QIDLTPTYGLTMKHAR 503          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP1A1_DICLA (Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 38/115 (33.04%), Postives = 62/115 (53.91%), Query Frame = -1
Query:  156 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKAR 491
            DT + G+ +P    V +N W I  D  LW +P SF P+RFL   G +L+ K    +++ FG G+R C G  +A   ++L L  ++    +K   G   + +DM  ++GLT++  R
Sbjct:  399 DTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGTELN-KLEGEKVMVFGLGKRRCIGEVIARNGVFLFLAIIVQKLHFKTLPG---EPLDMTPEYGLTMKHKR 509          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = -1
Query:  162 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG--LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQK 494
            +D  VAG+ +P G+QVL++ + +GR+  +W +P SF PER L    ++ +   +   I F  G+R C    L   +  ++L  L+  F WKL +  T   + ME    + L K
Sbjct:  412 SDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVEL-MESSHDMFLAK 523          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP2D6_HUMAN (Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFE---LIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D EV GF +P G  ++ N  ++ +D ++W+ P+ F PE F    LD +G   +    +PF AGRR C G PLA   L+L   SL+  F + +  G
Sbjct:  381 DIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 471          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = -1
Query:  216 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGR-----NFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDG 491
            D+ +  F +P    V++N WA+  +   WD P  F+PERF    LD  G      +   +PFGAG R C G  LA ++L+L +  L+  FD  + DG
Sbjct:  376 DSSIGEFTIPKDTHVVINLWALHHNEKEWDQPDRFMPERF----LDATGSHLITPSLSYLPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDVPDG 468          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP304_DROME (Probable cytochrome P450 304a1 OS=Drosophila melanogaster GN=Cyp304a1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = -1
Query:  225 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKL 491
            DTE+ G+ +P    V+ + +A   DA +W +P  F PERFL  D  +  +    +PFGAG+R+C G   A  ML+L+  ++   FD+ L
Sbjct:  391 DTELLGYRIPKDTIVVPSLYAFHSDARIWSDPEQFRPERFLDADGKLCLKLDVSLPFGAGKRLCAGETFARNMLFLVTATMCQHFDFVL 479          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 36/118 (30.51%), Postives = 66/118 (55.93%), Query Frame = -1
Query:  141 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLD-VKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 491
            ++ +  + +P  A+V++N W++  D   W NP+ F P+RFL  + + V   +   +PFGAG R+C G  LA   ++L L  ++  F  ++ +G      D+E KFG+ +Q  +P + +
Sbjct:  391 ESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFLDENGNRVYSPSPSFLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEG--DPLPDLEGKFGVVIQ-VKPFKVI 505          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = -1
Query:  219 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNF-----ELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLED 491
            D+ +  F +P    V++N WA+  D + WD P  F+PERF    LD  G +        +PFGAG R C G  LA + L++ +  L+  FD+ + D
Sbjct:  377 DSSIGEFAIPKDTHVIINLWALHHDKNEWDQPDRFMPERF----LDPTGSHLITPTPSYLPFGAGPRSCIGEALARQELFIFMALLLQRFDFDVSD 468          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C5131_DICDI (Probable cytochrome P450 513A1 OS=Dictyostelium discoideum GN=cyp513a1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = -1
Query:  171 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLT 491
            D E+ G+ +  G Q++ N WA  R+   +  P SF+PERF+      +  N  LI FG G R C G  LA   ++ ML SLIN +++   +  TP  ++   KFG+T
Sbjct:  394 DVELNGYKICAGTQIIQNIWATHRNEKQFSEPDSFIPERFIS---QQQSANSNLIHFGCGVRDCIGKSLADSEIFTMLASLINRYEFTNPNPSTP--LNEIGKFGIT 495          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CP1A2_CANFA3.081e-1132.46Cytochrome P450 1A2 OS=Canis familiaris GN=CYP1A2 ... [more]
CP1A2_CALJA3.081e-1134.78Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A... [more]
CP1A1_DICLA3.081e-1133.04Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp... [more]
C79B1_SINAL3.081e-1131.86Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
CP2D6_HUMAN4.024e-1136.84Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1... [more]
CP17A_PERLE4.024e-1136.08Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]
CP304_DROME5.256e-1137.08Probable cytochrome P450 304a1 OS=Drosophila melan... [more]
CP17A_RANDY5.256e-1130.51Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CP17A_MOUSE5.256e-1135.42Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
C5131_DICDI5.256e-1136.45Probable cytochrome P450 513A1 OS=Dictyostelium di... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
back to top