DN617823

Overview
NameDN617823
Unique NameDN617823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_XENLA (Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct:   77 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 128          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_PONAB (Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 130          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 130          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_HUMAN (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 130          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_CHILA (Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 130          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_BOVIN (Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 130          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACAM_MOUSE (Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15
Identity = 37/52 (71.15%), Postives = 48/52 (92.31%), Query Frame = 3
Query:  300 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED
Sbjct: 2051 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 2102          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_CAEEL (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis elegans GN=Y65B4BR.5 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 38/49 (77.55%), Postives = 45/49 (91.84%), Query Frame = 3
Query:  309 KLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            KLG+K VTGVSRV I+++KNILF I+KPDVFKSP S+TY+IFGEAKIED
Sbjct:   68 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIED 116          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_CAEBR (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis briggsae GN=CBG05114 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 38/49 (77.55%), Postives = 45/49 (91.84%), Query Frame = 3
Query:  309 KLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 455
            KLG+K VTGVSRV I+++KNILF I+KPDVFKSP S+TY+IFGEAKIED
Sbjct:   70 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIED 118          
BLAST of DN617823 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.521e-15
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  303 MLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPD 506
            MLKLG+K + GV+RVTI+++KNILF I+ PDV+K+P+S+TY++FGEAKIED            F+ P+
Sbjct:   80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPE 147          
The following BLAST results are available for this feature:
BLAST of DN617823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
NACA_XENLA2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACA_PONAB2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACA_MOUSE2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACA_HUMAN2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHILA2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOVIN2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACAM_MOUSE2.478e-1571.15Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEEL3.237e-1577.55Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEBR3.237e-1577.55Nascent polypeptide-associated complex subunit alp... [more]
NACA_DROME5.521e-1552.94Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617823 ID=DN617823; Name=DN617823; organism=Citrus sinensis; type=EST; length=604bp
GGCAACCAAACCTAACAGAACAAAGTTATCCCTATCTATCGAGGCTAAAC
TAGAGAAAGCTTATCAATTTTATCAAAATGTCGCCACCAGCTCCCATCGT
TGAGACACCAGTCGAGGAACCTGAAAAAATTAAGCCTCAGGATGAGGATG
AGCCTGTAGTTGAAGATGTTAAGGACGACGAGGAAGAAGATGATGACCAC
GACAATGACGATGATGACGAGGACGACGATGACAACAAAGACGATGGAGC
TCAAGGTGGGAGTTCAAAGCAGAGCAGAAGTGAGAAAAAGAGCCGCAAGG
CAATGCTGAAGTTGGGCATGAAACCTGTAACAGGAGTTAGCAGGGTAACC
ATCAAGAGAACCAAAAATATACTATTTTTCATCTCAAAGCCTGATGTTTT
CAAGAGCCCAAATTCTGAAACATACGTCATATTTGGGGAAGCCAAAATAG
AGGATTTGAGCACCCAGCTGCAGACACAGGCTGCCCAGCAGTTCAGGATG
CCTGACATGGGATCGGTGATGGCGAAACCAGATGCCTCTTCTGCTGCTGC
TGGTGCACAACAAGATGAGGAAGAGGAGGAAGTTGATGAGACGGGAGTTG
AGCC
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