DN617778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 9.460e-21 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT-GRQFRY 549 F LVL++NV G+G V +VS+KG T W ++RNWG NWQ NS L GQ+LSF VT++ G ++ YNV P WSFG T+T +QF Y Sbjct: 171 FELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTFTSNQQFSY 255
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.235e-20 Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = -3 Query: 316 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT 549 F LVL+TNVGG+G V + IKGS T W MSRNWG NWQSN+ L+GQ+LSF V +G V + +VAP WSFG TYT Sbjct: 168 FELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYT 245
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.107e-20 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = -3 Query: 307 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQ 549 F LVLITNV G+G V A+S+KGS+T W P++RNWG NWQ NS L GQ+LSF VT++ G ++ +V P W FG T+T Q Sbjct: 171 FELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQ 251
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.107e-20 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 310 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR 549 F +VLI NVGGAGD+ V +KG++T W M +NWGQNW + + L GQ LSF VTTS+G + +NV P NW FGQT+ GR Sbjct: 191 FLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDGR 270
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20 Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY-TGRQFRY 549 F LVL+ NV G+G V AVS++G+ T W MSRNWG NWQS + L GQ LSF VTT+ G ++ +VAP W FGQT+ T +QF Y Sbjct: 171 FELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFSTSKQFDY 255
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 6.132e-20 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = -3 Query: 307 FNLVLITNVGGAGDVHAVSIKGSR--TRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQ 549 F LVL+TNV AG V ++ ++GSR W MSRNWG NWQS +YL+GQ LSF VT ++G ++V V PP+W FGQT+ Q Sbjct: 178 FELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFASTQ 260
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.008e-20 Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = -3 Query: 319 FNLVLITNVGGAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY 549 FNLV+++NVGGAGDV +S+KG+ R +W P+ RNWGQ WQ++ L G+SL+F V T + S++V PP+W FG TY Sbjct: 185 FNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTY 262
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.046e-19 Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = -3 Query: 298 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY-TGRQFRY 549 F LVL+TN+ G+G + ++S+KGS T W MSRNWG NWQ + L GQ+LSF VT++ G ++V +V P WSFGQT+ T +QF Y Sbjct: 165 FELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQQFDY 249
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.046e-19 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = -3 Query: 319 FNLVLITNVGGAGDVHAVSIKGSRT-RWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY 549 F LVLI+NV G G++ V IKGS++ +W+ MSRNWG N+QSN+YLNGQSLSF V S+G + NV P NW FGQ++ Sbjct: 172 FELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249
BLAST of DN617778 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.043e-19 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 310 FNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGR 549 F +VLI NVGGAGD+ V +K ++T W M +NWGQNW +++ L GQ LSF VTT++G + +NV P NW FGQT+ G+ Sbjct: 197 FLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDGK 276 The following BLAST results are available for this feature:
BLAST of DN617778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617778 ID=DN617778; Name=DN617778; organism=Citrus sinensis; type=EST; length=551bpback to top |