DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BARHE (50S ribosomal protein L3 OS=Bartonella henselae GN=rplC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31 Identity = 79/208 (37.98%), Postives = 114/208 (54.81%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKP 626 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ ++ GHF V K K+ EF V+ D LL IGT + HF+PGQ VD+ R F G ASHG S++HR+ GSTGQ PGKVF + T +N+ V D R L+ VRG V G+ G ++ ++DA+ KKP Sbjct: 5 VIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKNTSQALRGHFAKASVEPKAKIAEFRVSPDNLLDIGTEITAEHFVPGQRVDVTGTTIGKGFAGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVVSTDVERGLILVRGAVSGSKGAWILVRDAI-KKP 211
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RM09_SCHPO (60S ribosomal protein L9, mitochondrial OS=Schizosaccharomyces pombe GN=mrpl9 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 77/206 (37.38%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 3 LIAVKCGITATWD-KWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTE-DALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +I VK G+T WD K G ++P+++L D V+T EK G++++QVG G +K K +TK E G+F + + K +REF V + L+ GT +F P QYVD+ RWGF G ASHGASLSHR+ GSTGQ P +V RTVKN+ V+ +D + V+G +PG + + V++ D + Sbjct: 46 VILVKKGMTNAWDEKTGMQVPLTILQFDRVQAIDVRTKEKHGYYAVQVGSGIRKPKSITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGTIFTTDYFKPKQYVDVKGITKGKGFAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSRVLPGRKMAGHMGHRSRTVKNLLVWAVDADLECILVKGSIPGPNKSAVYVTDTI 251
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_SINMW (50S ribosomal protein L3 OS=Sinorhizobium medicae (strain WSM419) GN=rplC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 76/204 (37.25%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G IPV+VL +++ V +T EK G+ ++Q+G G+ K K+ K GHF A V K KL EF V+ D L+ IG+ L HF+ GQ VD+ R F G+ A+HG S+SHRS GSTG PG+V+ + T +N+ V D R L+ V+G VPG+ G+++ ++DA+ Sbjct: 5 VIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKNTPKAMRGHFAAASVEPKAKLVEFRVSADNLIDIGSELTAGHFVAGQLVDVTGTTIGKGFAGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVVSTDEDRGLILVKGAVPGSKGSWIVVRDAI 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_KLEP7 (50S ribosomal protein L3 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rplC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ V+ N V+QVK +G+ ++QV G KK +TKPE GHF GV R L EF + + +G ++ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLADGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_KLEP3 (50S ribosomal protein L3 OS=Klebsiella pneumoniae (strain 342) GN=rplC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ V+ N V+QVK +G+ ++QV G KK +TKPE GHF GV R L EF + + +G ++ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPGA+G+ + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLADGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_JANSC (50S ribosomal protein L3 OS=Jannaschia sp. (strain CCS1) GN=rplC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 80/215 (37.21%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK-PDVXLLP 644 +IA K G+T + + G +IPV+VL +D V KT + +G+ ++Q+G G K K + P G F V KRKL EF V D L+ +G + H+ GQ+VD+ R F G+ ASHG S+SHRS GSTGQ PG+VF + T +N+ + + D R L+ ++G VPG+ G +V +KDAV K P+ +LP Sbjct: 6 VIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAKKTSDSDGYSAVQLGAGTAKAKRTSAPMRGVFAKASVEPKRKLVEFRVDADNLIEVGEEIIADHYFEGQFVDVTGTSIGKGFQGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQIVRTDTDRGLIMIKGAVPGSKGGWVTVKDAVKKPFPENAILP 220
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_HAEDU (50S ribosomal protein L3 OS=Haemophilus ducreyi GN=rplC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 LI K G+T +++ G IPV+V+ ++ N V+QVKT E +G+ ++QV G KK +TKPE GHF GV R L EF TE +G + V F + VD+ RW F+ A+HG SLSHR LGS GQ PG+VF + TV+++ V ++D R L+ V+G VPGA+ + V +K AV Sbjct: 4 LIGRKVGMTRVFNEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTKPEAGHFVKAGVEAGRGLWEFR-TEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFAGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVDAERKLLLVKGAVPGATNSNVIVKPAV 206
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_VIBSL (50S ribosomal protein L3 OS=Vibrio splendidus (strain LGP32) GN=rplC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.219e-31 Identity = 75/204 (36.76%), Postives = 107/204 (52.45%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ V+ N +SQVKT E +G+ ++QV G KK +TKPE GHF GV R L EF + +G L V F + VD+ RW F +HG SLSHR+ GS GQ PG+VF + T +N+ + ++D RNL+ ++G VPG++G V +K AV Sbjct: 4 LVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLETDGYAAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLENGEEFEVGAELNVELFNEIKKVDVTGTSKGKGFQGAIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGSTGGNVIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_SALTY (50S ribosomal protein L3 OS=Salmonella typhimurium GN=rplC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.219e-31 Identity = 78/204 (38.24%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ V+ N V+QVK +G+ ++QV G KK +TKPE GHF GV R L EF + E +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPGA+G + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPAV 207
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_SALTI (50S ribosomal protein L3 OS=Salmonella typhi GN=rplC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.219e-31 Identity = 78/204 (38.24%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ K G+T + + G IPV+V+ V+ N V+QVK +G+ ++QV G KK +TKPE GHF GV R L EF + E +G S+ V F + VD+ RW F+ A+HG SLSHR GS GQ PGKVF + TV+++ V ++D RNL+ V+G VPGA+G + +K AV Sbjct: 4 LVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPAV 207 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |