DN617775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUME (50S ribosomal protein L3 OS=Brucella melitensis GN=rplC PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUMB (50S ribosomal protein L3 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUC2 (50S ribosomal protein L3 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUAB (50S ribosomal protein L3 OS=Brucella abortus GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUA2 (50S ribosomal protein L3 OS=Brucella abortus (strain 2308) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_BRUA1 (50S ribosomal protein L3 OS=Brucella abortus (strain S19) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 +IA K G+T ++ G +PV+VL +++ V +T EK G+ ++Q+G G K K+ +K GHF V K KL EF V+ D LL +G + HF+ GQ VD+ R F G ASHG S++HRS GSTGQR PGKVF + T +N+ V D R L+ VRG VPG+ G ++ ++DAV Sbjct: 5 VIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKNTSKAMRGHFAKAEVEPKAKLAEFRVSPDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGFAGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVVSTDSDRGLILVRGAVPGSKGAWILVRDAV 208
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ACIBY (50S ribosomal protein L3 OS=Acinetobacter baumannii (strain AYE) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDAL--LPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ KCG+T + G +PV+V+ VD N ++Q+KT E +G+ ++QV G++++ +T + GHF GV R ++EF VTE L +G ++GV F GQ VD+ RW F+ A+HG S+SHR LGSTGQ PG+VF + TV+ + + +D R+++ V+G +PGA+G V ++ + Sbjct: 5 LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPTI 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ACIBT (50S ribosomal protein L3 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rplC PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDAL--LPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ KCG+T + G +PV+V+ VD N ++Q+KT E +G+ ++QV G++++ +T + GHF GV R ++EF VTE L +G ++GV F GQ VD+ RW F+ A+HG S+SHR LGSTGQ PG+VF + TV+ + + +D R+++ V+G +PGA+G V ++ + Sbjct: 5 LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPTI 210
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ACIBC (50S ribosomal protein L3 OS=Acinetobacter baumannii (strain ACICU) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDAL--LPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ KCG+T + G +PV+V+ VD N ++Q+KT E +G+ ++QV G++++ +T + GHF GV R ++EF VTE L +G ++GV F GQ VD+ RW F+ A+HG S+SHR LGSTGQ PG+VF + TV+ + + +D R+++ V+G +PGA+G V ++ + Sbjct: 7 LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPTI 212
BLAST of DN617775 vs. ExPASy Swiss-Prot
Match: RL3_ACIB5 (50S ribosomal protein L3 OS=Acinetobacter baumannii (strain AB0057) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33 Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 3 LIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDAL--LPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXXQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 614 L+ KCG+T + G +PV+V+ VD N ++Q+KT E +G+ ++QV G++++ +T + GHF GV R ++EF VTE L +G ++GV F GQ VD+ RW F+ A+HG S+SHR LGSTGQ PG+VF + TV+ + + +D R+++ V+G +PGA+G V ++ + Sbjct: 5 LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPTI 210 The following BLAST results are available for this feature:
BLAST of DN617775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617775 ID=DN617775; Name=DN617775; organism=Citrus sinensis; type=EST; length=655bpback to top |