DN617754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.599e-58 Identity = 103/172 (59.88%), Postives = 124/172 (72.09%), Query Frame = 3 Query: 141 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647 GW ATFY YG+LYS GYGTNTAALST LFN+G SCG CY + C+ D ++C+ G S+ +TATN CPPN AL ND GGWCNPP QHFDMAEPA+L+I Y GIVP+ ++R+PCAK+GG+RFT+NG YF LVLV+NVGG + SVSIKGS+TGW Sbjct: 33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGW 204
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.310e-57 Identity = 98/170 (57.65%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 141 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKT 641 GW HATFY YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C+ D WC PG S+ +TATNFCPPN L +D+GGWCNPP HFDMA+PA+ +I YR GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNVG A + ++ +KGSK+ Sbjct: 33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKS 202
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 6.720e-57 Identity = 98/169 (57.99%), Postives = 120/169 (71.01%), Query Frame = 3 Query: 144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKT 641 WQ HATFY YGNLYSQGYGT AALSTALFN+G SCG CY++ C+ P+WC PG ++ +TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YF LVLVTNV A + S+ + GS T Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNT 207
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 8.776e-57 Identity = 104/170 (61.18%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN-DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647 W ATFY YG+LY GYGT TAALSTALFN G SCG+C+ + C+ +WC PG SI VTATNFCPPN ALS D GGWCNPP +HFDM++PA+ IA YRAGIVP+++RR+PC + GGIRF VNGHSYF LVLVTNVGG+ V + IKGS TGW Sbjct: 25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGW 194
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 1.955e-56 Identity = 100/171 (58.48%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 141 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTG 644 GW G ATFY YGNLY+QGYGT TAALSTALF++G SCG CY + C+ DP+WC G S+ VTATNFCPPN AL +D+GGWCNPP HFDMA+PA+ +I YR GIVP++FRR+PC ++GG+RFTV G YF LVLVTNV A V S+ ++GS+ G Sbjct: 33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRG 203
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.955e-56 Identity = 98/168 (58.33%), Postives = 126/168 (75.00%), Query Frame = 3 Query: 150 SGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647 SG ATFY YGNLYS GYGTNTAALS+ALFN+G +CG CY++ C+ ++ KWC G S+ +TATN CPP+ + +++GGWCNPP QHFDMA+PA+ QI YR GIVP++F+R+ C +KGG+RFT+NG+SYF LVL+TNVGG + SV IKG+KTGW Sbjct: 26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGW 193
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.554e-56 Identity = 101/181 (55.80%), Postives = 129/181 (71.27%), Query Frame = 3 Query: 138 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN----DPKWCLPG----SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIK---GSKTGW 647 G W HATFY YGN Y QGYGT+TAALS +F +GLSCG+C+E++C D + CLP SI+VTAT+ CP N AL D GGWCNPPL HFD+++PAFL+IA++++GIVP+S+RR+ C +KGG+RFT+NGHSYFNLVLV+NVGGA DVH+V++K G K W Sbjct: 28 GRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARW 208
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.335e-56 Identity = 99/170 (58.24%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 141 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKT 641 GW HATFY YGNLY+ GY TNTAALSTALFN+G SCG CY++ C+ P+WCL G SI +TATNFCPPN A ++DNGGWCNPP HFDMA+PAFL IA+Y+AGIVPI ++++ C + GG+RFT+NG +YF LVL++NV G ++ V IKGSK+ Sbjct: 27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKS 196
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 4.356e-56 Identity = 99/172 (57.56%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 144 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGS-KTGW 647 WQ HATFY YG+LYSQGYGT AALSTALFN+G SCG CY++ C+ P+WC PG ++ +TATNFCPPN L +DNGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV + S+ I GS T W Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDW 205
BLAST of DN617754 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 5.689e-56 Identity = 97/182 (53.30%), Postives = 127/182 (69.78%), Query Frame = 3 Query: 117 GTFGDYGG-----GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAXDVHSVSIKGSKTGW 647 G +GG GW G ATFY YG+L+ QGYG TAALSTALFNNG CG+CYE+ CE+ P+WCLPGSI +TATNFCPP+ NDN WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L NVGGA V ++ IKG++T W Sbjct: 76 GALPSHGGQVPHSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQW 255 The following BLAST results are available for this feature:
BLAST of DN617754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617754 ID=DN617754; Name=DN617754; organism=Citrus sinensis; type=EST; length=647bpback to top |