DN617726

Overview
NameDN617726
Unique NameDN617726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.633e-26
Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = -2
Query:  126 VLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYS-FVPERFL-----GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 545
            V+KET RL+P++PL LP ++     V G+ +P    V++N WAIGRD S+W    S F PERF+     G+DL     +F ++PFGAGRR CPG  +AI  +   L  L+++FDW++E    P  +DM+E     + +  PL A P
Sbjct:  374 VVKETLRLYPSLPLALPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEG--DPSELDMKEACATKMPRQTPLLAYP 517          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.258e-25
Identity = 65/148 (43.92%), Postives = 89/148 (60.14%), Query Frame = -2
Query:  123 AVLKETFRLHPAVPLLL-PRKASADTEVA-GFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL----GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 548
            AV+KET R HP  PLL   R A+AD  +  G +VP G   +VN WAI  DA++W +P +F PERFL    G D+DV+G +  L PFGAGRR+CPG  L +  + L +  L+++F W L DG     + ++E   L+L+   PL A  I
Sbjct:  398 AVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAA--AVCLDEVLKLSLEMKTPLVAAAI 543          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.643e-25
Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = -2
Query:  129 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL--GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 548
            AV+KET RL+P  PL  PR+   D  + G+ V  G +++ N   I  D ++W NP  F PERFL    D+D+KG++F+L+PFG GRRICPG+ L ++ + L L S ++SF+  L     P  +DM E F  T  KA PL  L
Sbjct:  371 AVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFE-ILNPSTEP--LDMTEVFRATNTKATPLEIL 509          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 8.155e-25
Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = -2
Query:  117 VLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQK-------ARPLRALPIAI 545
            V+KET RL+P +PLL+P       ++ G+ V  G +V++N+WA+ R    WD+   F PERF     D KG  FE +PFG GRR CPG    + +L L++  L+  FDW L  G+ P  +DM+     T ++       A P +  PI I
Sbjct:  383 VIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDMDFVVTATTRRKNHLQLVASPYKLAPIQI 532          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.099e-24
Identity = 59/148 (39.86%), Postives = 88/148 (59.46%), Query Frame = -2
Query:  123 AVLKETFRLHPAVPLLL-PRKASADTEVA-GFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL----GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 548
            AV+KE  R+HP  PLL   R ++ D  +  G  VP G   +VN W+I  D ++W++PY F PERF+    G ++DV+G +  L PFGAGRR+CPG  L +  + L +  L++ F+W L     P  +D+ E   L+ + ARPL  +P+
Sbjct:  399 AVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEW-LPHAEHP--VDLSEVLKLSCEMARPLHCVPV 543          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.461e-22
Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = -2
Query:  165 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL--GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 548
            AV+KET RL  A+PLL+P     D ++ GF +P  +++LVN W +  + + W NP  F PERFL  G  ++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+     G     ID  EK G
Sbjct:  359 AVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSKIDTSEKGG 486          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.880e-21
Identity = 56/142 (39.44%), Postives = 79/142 (55.63%), Query Frame = -2
Query:  129 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 548
            A +KE FRLHP  P  LP  ++ DT V G+ +P G+ VL++   IGR+ S+WD P+ F PER L  +  +D+   +  +I F AGRR C G+ +   M Y++L  LI  F W    G     ID+ E     L  A+PL A+
Sbjct:  379 ACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPG--KNKIDISESKN-DLFMAKPLYAV 517          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.455e-21
Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = -2
Query:  123 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKG-RNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 548
            AV+ E  R HP    LLP   + DT + G+ VP    +      IGRD   W+ P +F PERF+G +  +D+ G R  +++PFGAGRRICPG+ LA+  L   + +++  F WK   G     +D+ EK   T+    PL+AL +
Sbjct:  360 AVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQG---HEVDLTEKLEFTVVMKHPLKALAV 501          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.207e-21
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = -2
Query:  120 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEK---FGLTLQKARPLRALPIA 548
            AV+KET RL  A+PLL+P     D ++ GF +P  +++LVN W +  + +LW  P  F PERFL  +  ++  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+     G     ID  EK   F L + K   + A P A
Sbjct:  359 AVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG--QSKIDTSEKGGQFSLHILKHSTIVAKPRA 504          
BLAST of DN617726 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.188e-21
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = -2
Query:  165 AVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFG 548
            AV+KET RL  A+PLL+P     D ++ GF +P  +++LVN W +  + + W NP  F PERFL  +  ++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+     G     ID  EK G
Sbjct:  359 AVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSKIDTSEKGG 486          
The following BLAST results are available for this feature:
BLAST of DN617726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 304
Match NameE-valueIdentityDescription
C75A1_PINTA9.633e-2641.10Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C78A1_MAIZE1.258e-2543.92Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C82A2_SOYBN1.643e-2543.66Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C99A2_ORYSJ8.155e-2538.00Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C78A4_PINRA3.099e-2439.86Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
TCMO_POPKI6.461e-2241.54Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C79A2_ARATH1.880e-2139.44Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C89A2_ARATH2.455e-2137.93Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PEA3.207e-2138.51Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_POPTM4.188e-2140.77Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01J18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617726 ID=DN617726; Name=DN617726; organism=Citrus sinensis; type=EST; length=549bp
TATTTCGAATAAGAATAAACATTGTACAAGCATACCGAGTAAGGACAAAG
TCCATGCTACAACCTGGAAATTCATTTCATTATAGCACCAAAAAAAAAAA
AAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGAAGGGGCCGAGCC
TTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTATGGTCTGTGGAGT
AACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAAGTGAACCTAACA
TCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGACATATTCGTCGT
CCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTTGACATCAAGATC
TAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGTTGTCCCATAAGC
TAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACTTGTGCACCATTT
GGCACCATGAATCCGGCAACTTCTGTATCTGCTGAGGCTTTACGGGGAAG
TAAAAGAGGAACTGCCGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCT
back to top