DN617696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METKA (30S ribosomal protein S11P OS=Methanopyrus kandleri GN=rps11p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17 Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 V ADR+ESSPYAAM AA+ + E GITA+H+K+RA GAQ+A+RALAR+G+KIGRIEDVTPIP D T Sbjct: 48 VDADREESSPYAAMKAARRAAEEAMEKGITAVHVKVRAPGGHGPKTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 126
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRKO (30S ribosomal protein S11P OS=Pyrococcus kodakaraensis GN=rps11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17 Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE SPYAAM+AA+ + E GIT +HIK+RA GAQ+A+RAL+R+G++IGR+EDVTPIP D T Sbjct: 51 VKADRDEPSPYAAMIAARRAAEEAMEKGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRVEDVTPIPHDGT 129
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRHO (30S ribosomal protein S11P OS=Pyrococcus horikoshii GN=rps11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE SPYAAMLAA+ + E GI +HI++RA GAQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 48 VKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRFU (30S ribosomal protein S11P OS=Pyrococcus furiosus GN=rps11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE SPYAAMLAA+ + E GI +HI++RA GAQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 48 VKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_PYRAB (30S ribosomal protein S11P OS=Pyrococcus abyssi GN=rps11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE SPYAAMLAA+ + E GI +HI++RA GAQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 48 VKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_THEON (30S ribosomal protein S11P OS=Thermococcus onnurineus (strain NA1) GN=rps11p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.072e-17 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE SPYAAM+AA+ + E G +HIK+RA GAQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 50 VKADRDEPSPYAAMIAAKRAAEEAMEKGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 128
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_THEGJ (30S ribosomal protein S11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps11p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.072e-17 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE SPYAAM+AA+ + E G +HIK+RA GAQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 49 VKADRDEPSPYAAMIAARRAAEEAMEKGFVGVHIKVRAPGGSKSKSPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 127
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_STAMF (30S ribosomal protein S11P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps11p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.072e-17 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADR++ SPYAAM+AA + + GITALHIK+RA GAQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 44 VKADREKPSPYAAMIAASRAAAEAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_METMJ (30S ribosomal protein S11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps11p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = -3 Query: 247 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 480 VK DR+ESSPYAAM A V+ ++ GIT +H+K+RA GAQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 40 VKQDRNESSPYAAMQMAIQVAQNARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 117
BLAST of DN617696 vs. ExPASy Swiss-Prot
Match: RS11_ARCFU (30S ribosomal protein S11P OS=Archaeoglobus fulgidus GN=rps11p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 46/79 (58.23%), Postives = 54/79 (68.35%), Query Frame = -3 Query: 244 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 480 VKADRDE +PY AM AA + KE GI +HIK+RA GAQ+A+RALAR+G+KIGRIEDVTPIP D T Sbjct: 44 VKADRDEGNPYTAMQAALRAAAIAKEKGIDGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 122 The following BLAST results are available for this feature:
BLAST of DN617696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617696 ID=DN617696; Name=DN617696; organism=Citrus sinensis; type=EST; length=488bpback to top |