DN617673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR1_RAT (Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25 Identity = 74/191 (38.74%), Postives = 106/191 (55.50%), Query Frame = 3 Query: 42 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLL-IKIQHTD-VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV 608 V K L + GFP +S+ ++ + ++ + VLL+ L+LS DPYMR KL G+ + G VA+V++S + + +V GW +S+ L + + D +PLS G +GMPG+TAY GL ++C K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS EKV Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELRT----TELPPLNNGEVLLEALFLSVDPYMRVAAKKLKE---------GDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKV 179
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.912e-25 Identity = 75/192 (39.06%), Postives = 105/192 (54.69%), Query Frame = 3 Query: 42 VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV 608 V K L + G+P S+ ++ + + LK E VLL+ L+L+ DPYMR KL G+ + G VA+V++S + + +V GW +S+ L L+ +PLS G +GMPG+TAY GL ++C K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS EKV Sbjct: 2 VRAKSWTLKKHFVGYPTPSNFELKTVELPPLKNGE-----VLLEALFLTVDPYMRIAARKLKE---------GDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV 179
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17 Identity = 62/192 (32.29%), Postives = 100/192 (52.08%), Query Frame = 3 Query: 51 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK 605 +RV+L++ G P + ++ ++ V EG V ++ LYLS DPYMR RM++ ++ + + ++G GV + +S H N+ K D V + ++ +L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G L GQ +L GC VVG G+ EK Sbjct: 4 QRVVLNSRPGKNGHPVAENFRVEEVNLPDCVNEGQ---VQVRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEK 192
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 61/192 (31.77%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 51 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWG-STGWEEYSLVTAPQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK 605 +RV+L + G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ + +S H AK D V W+ +++ L + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G+ EK Sbjct: 4 QRVVLDSRPGKNGNPVAENFRVEEVSLPDTINEGQ---VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEK 192
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 51 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK 605 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ L GC VVG G+ EK Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEK 192
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 51 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWG-STGWEEYSLVTAPQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK 605 +RV+L++ G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ V +S H K D V W+ +++ L + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G++EK Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLPDALNEGQ---VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEK 192
BLAST of DN617673 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 58/192 (30.21%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 51 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGSTGWEEYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK 605 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ GC VVG G+ EK Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK 192 The following BLAST results are available for this feature:
BLAST of DN617673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617673 ID=DN617673; Name=DN617673; organism=Citrus sinensis; type=EST; length=614bpback to top |