DN617618

Overview
NameDN617618
Unique NameDN617618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.811e-22
Identity = 48/124 (38.71%), Postives = 80/124 (64.52%), Query Frame = -1
Query:  234 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD 602
            +  D++ +KYL+A++KE LR++PP P+    E+ ED ++  YH+P GT++++N W + R+   W  +  EF+PER L T   VD   Q+FE +PF  GRR CP ++  + + ++ LA ++ GFD
Sbjct:  332 SEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDT--SVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFD 453          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.089e-22
Identity = 66/162 (40.74%), Postives = 84/162 (51.85%), Query Frame = -1
Query:  132 TSQDMKNLKYLRAIVKETLRIYPPGPVTG-IREAMEDCEI-GGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH--ADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV-GGTPVGMQIGLGLALPKSNPLEVIIKPRLA 602
            T  D+  + YL+A+VKETLR +PPGP+    R A  D  +  G  VP GT  +VN+W +  D  +W +P  F PERFL +   ADVDV        PF  GRR CPG   GL  V L +AR++  F  A   G   V +   L L+L    PL     PR A
Sbjct:  386 TDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIPRTA 547          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.089e-22
Identity = 57/151 (37.75%), Postives = 91/151 (60.26%), Query Frame = -1
Query:  159 QDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGL----GLALPKSNPL 596
            +D++N+KYL+A++KE  R++PP P+   R   ED ++ GY++  GT +I+N W + RDP +W  +  EF+PER L   + +D + +   +IPF  GRR CPG+   L +V++T+A ++  FD     G P G Q  L    GL + +  PL
Sbjct:  342 KDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHL--DSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAG-PNGDQPDLTEAFGLDVCRKFPL 489          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: THAS_RAT (Thromboxane-A synthase OS=Rattus norvegicus GN=Tbxas1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.035e-22
Identity = 61/150 (40.67%), Postives = 82/150 (54.67%), Query Frame = -1
Query:  138 KNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPR 587
            + L YL  +V ETLR+YPP      REA +DCE+ G H+P G+ L + +  LH DP  W NP  F PERF    A+  +  + F Y+PF  G RSC G+  GL +V+LTL ++L  F       T V +Q+    AL   N + V I  R
Sbjct:  388 EGLPYLDMVVAETLRMYPPA-FRFTREAAQDCEVLGQHIPAGSVLEIAVGALHHDPEHWPNPETFDPERFT---AEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACPETQVPLQLESKSALCPKNGVYVKIVSR 533          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP4V3_MOUSE (Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.270e-22
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = -1
Query:  126 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLG--LALPKSNPLEVIIKPRLAED 602
            T +D+K LKYL  ++KETLR++P  P+   R   EDCE+GGY V KGT  I+  + LHRDPR + +P EFRPERF   ++        + Y+PFS G R+C G    +   +  LA IL+ F    V       ++GL   L L  +N + + +K R  +D
Sbjct:  371 TLEDLKKLKYLDCVIKETLRVFPSVPLFA-RSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQ---GRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQF---WVESNQKREELGLAGDLILRPNNGIWIKLKRRHEDD 524          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.270e-22
Identity = 53/152 (34.87%), Postives = 91/152 (59.87%), Query Frame = -1
Query:  150 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVI 602
            +  D++ ++YL+A+VKE LR++PP P+    ++ +D  +   H+P GT++IVN+W + R+   W  +  EFRPER L + +  D   Q FE IPF  GRR CPG++  + + ++ LA ++ GFD  ++      +   +G  + + +PL VI
Sbjct:  330 SEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPS--DFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSI-DDETDVAESIGSVIRRMHPLYVI 478          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.270e-22
Identity = 45/124 (36.29%), Postives = 79/124 (63.71%), Query Frame = -1
Query:  234 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCE-FRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD 602
            + +D++N+ YL+A++KET R++PP P+    E+++D  +G YH+P GT++++N W + R+   W    E FRPER L   + VD    +FE +PF  GRR CP ++  + ++++ LA  +  +D
Sbjct:  333 SEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHL--DSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYD 454          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.174e-21
Identity = 51/158 (32.28%), Postives = 87/158 (55.06%), Query Frame = -1
Query:  120 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPRLAEDLF 593
            D+  L Y++AI++E  R++P         A+ D  + GYH+PKG++++++ + L R+P++W +P  F+PER L   ++V +      +I FS G+R C     G  I  + LAR+LQGF     G       +     +  S PL ++ + RL+EDL+
Sbjct:  382 DIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKPLVLVGELRLSEDLY 539          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = -1
Query:  234 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPC-EFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD 602
            T ++ + + YL+A++KE LR+ PP P+   R   ED ++ GY++P GT++IVN W + RD   W     EF+PER L T  ++D   Q F++IPF  G+R CPG+     ++ +TLA I++ F+
Sbjct:  341 TEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDT--NLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFN 462          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 58/150 (38.67%), Postives = 81/150 (54.00%), Query Frame = -1
Query:  138 KNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPR 587
            + L YL  ++ ETLR+YPP      REA +DCE+ G  +P GT L + +  LH DP  W NP  F PERF    A+  +  + F Y+PF  G RSC G+  GL +V+LT+ ++L  F       T V +Q+    AL   N + + I  R
Sbjct:  388 EGLPYLDMVISETLRMYPPA-FRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPETFDPERFT---AEARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKFRFEASPETQVPLQLESKSALGPKNGVYIKIVSR 533          
The following BLAST results are available for this feature:
BLAST of DN617618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 448
Match NameE-valueIdentityDescription
C71AP_ARATH1.811e-2238.71Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C78A1_MAIZE3.089e-2240.74Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C71AC_ARATH3.089e-2237.75Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
THAS_RAT4.035e-2240.67Thromboxane-A synthase OS=Rattus norvegicus GN=Tbx... [more]
CP4V3_MOUSE5.270e-2239.13Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1... [more]
C71AN_ARATH5.270e-2234.87Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH5.270e-2236.29Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C79B3_ARATH1.174e-2132.28Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C71AK_ARATH2.002e-2139.52Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
THAS_MOUSE2.615e-2138.67Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01H09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617618 ID=DN617618; Name=DN617618; organism=Citrus sinensis; type=EST; length=641bp
TTTTTTTTTTTTTTTTCACTTAGAAAAATGTTATTGGCGCATTAGTCGCC
TTCACATTAGTTCTTTCTGATAATACACGTAAATGATCGTTTAAAATGAT
GAAATCTTCAAATGCATCGAAAAAGATCCTCAGCGAGGCGAGGTTTTATG
ATAACTTCAAGAGGGTTCGATTTGGGCAGGGCAAGGCCCAAACCAATCTG
CATACCAACAGGTGTGCCCCCCACGGTTGCCAAATCAAACCCCTGAAGAA
TCCGAGCAAGCGTTAATTGAACAATCTGTAAGCCAGATGTCATTCCAGGG
CACGATCTTCTTCCAAAGCTGAACGGAATATACTCAAAATGTTGAGTGTT
GACATCAACATCAGCATGAGTTGTCAGAAACCTTTCTGGTCTGAACTCGC
ACGGATTTTCCCACATCCGAGGGTCTCTGTGCAGCTTCCATATGTTCACG
ATCAAACGCGTGCCTTTCGGGACATGATAGCCACCAATTTCACAATCTTC
CATGGCTTCCCGAATTCCTGTTACAGGACCAGGTGGGTAAATCCGTAGAG
TTTCTTTGACAATGGCTCGAAGGTATTTTAGGTTCTTCATATCCTGACTC
GTTTACCCATCTGTCTCTTCCAACATGGACGTCCAACTCTT
back to top