DN617618

Overview
NameDN617618
Unique NameDN617618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: THAS_PIG (Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.416e-21
Identity = 61/150 (40.67%), Postives = 80/150 (53.33%), Query Frame = -1
Query:  138 KNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPR 587
            + L YL  ++ ETLR+YPP      REA  DCE+ G  +P GT L V +  LH DP+ W +P  F PERF    A+     Q F Y+PF  G RSC G+  GL  ++LTL  IL+ F       T V +Q+    AL   N + + I PR
Sbjct:  389 QGLPYLDMVLSETLRMYPPA-FRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPETFDPERFT---AEAQRLQQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFEACPETQVPLQLESKSALSPKNGVYIRIVPR 534          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.416e-21
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = -1
Query:  126 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGL--GLALPKSNPLEVIIKPRLAED 602
            T +D+K L+YL  ++KETLR++P  P+   R   EDCE+ GY V KGT  ++  + LHRDPR + NP EF+PERF   +A        + Y+PFS G R+C G    +   +  L+ IL+ F    +       ++GL   L L  SN + + +K R A++
Sbjct:  371 TVEDLKKLRYLECVIKETLRLFPSVPLFA-RSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQ---GRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF---WIESNQKREELGLEGQLILRPSNGIWIKLKRRNADE 524          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.416e-21
Identity = 47/130 (36.15%), Postives = 81/130 (62.31%), Query Frame = -1
Query:  234 EETDG*TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD 620
            ++  G +  D++++KYL+A++KETLR++PP P+    E+  D ++  YH+P GT +++N W + R+   W  +  EFRPER L ++  VD   Q  E +PF  GRR CP ++  + + ++ LA ++  FD
Sbjct:  328 KDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSY--VDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFD 455          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.416e-21
Identity = 54/152 (35.53%), Postives = 91/152 (59.87%), Query Frame = -1
Query:  153 QDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWE-NPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL---ATVGGTPVGMQIGLGLALPKSNPLEV 596
            ++++++KYL+A++KE LR++PP P+  +R   +D ++ GY +  GT++I N W + RD   W  +  EFRPER L   + +D    +FEYIPF  GRR CPG+   + +V++TLA ++  F+    A + G    +    G+ + +  PL V
Sbjct:  342 EEVEDMKYLKAVIKEGLRLHPPFPLLVLRLLTQDVKLKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHL--DSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPLIV 491          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP4V2_PONAB (Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.461e-21
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = -1
Query:  126 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGL--GLALPKSNPLEVIIKPRLAED 602
            T +D+K L+YL  ++KETLR++P  P+   R   EDCE+ GY V KGT  ++  + LHRDPR + NP EF+PERF   +A        + Y+PFS G R+C G    +   +  L+ IL+ F    +       ++GL   L L  SN + + +K R A++
Sbjct:  371 TVEDLKKLRYLECVIKETLRLFPSVPLFA-RSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQ---GRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF---WIESNQKREELGLEGQLILRPSNGIWIKLKRRDADE 524          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.461e-21
Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = -1
Query:  120 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLA---LPKSNPLEVIIKPRLAEDLF 593
            D+ NL Y++A VKE  R++P  P      +  D  + GY +PKG+ ++++   + R+P +W+ P +F PER L+T+  VD+N      I FS GRR C G+  G  +  + LAR++QGF    V G     +I +  +   L  + PL  +  PRLA  ++
Sbjct:  370 DLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGK---NKIDISESKNDLFMAKPLYAVATPRLAPHVY 527          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 46/124 (37.10%), Postives = 79/124 (63.71%), Query Frame = -1
Query:  234 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD 602
            + ++++N+ YL+A++KE LR++PP P+    E+ +D  +G +H+P GT++++N W + R+   W  +  EFRPER L   + VD   Q FE IPF  GRR CP ++  + + ++ LA ++  FD
Sbjct:  332 SEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHL--DSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFD 453          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21
Identity = 60/156 (38.46%), Postives = 84/156 (53.85%), Query Frame = -1
Query:  138 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGL-GLALPKSNPLEVIIKPR 602
            T   +  ++YL  +V ETLR+YP       R   +D EI G  VPKGT ++V ++ LHRDP +W  P EFRPERF   H D       + Y+PF  G R+C GM   L  ++L L R+LQ F       T + +++   GL  P+  P+ + I PR
Sbjct:  346 TYDALAQMEYLDMVVNETLRLYPIAARLE-RACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKD---TINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFKPCKETQIPLKLTTQGLTQPE-KPVVLKILPR 496          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.938e-21
Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = -1
Query:  234 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLT--THADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD 602
            T  ++  +  L+A++KETLR++PP P+     +++ CE+ GY +P  TR++VN W L R    WE   EF PERFL+      VD+    F+++ F  GRR CPG+ S    ++  L+ ++  FD
Sbjct:  379 TEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFD 503          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.938e-21
Identity = 56/156 (35.90%), Postives = 90/156 (57.69%), Query Frame = -1
Query:  153 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPC-EFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVG-----MQIGLGLALPKSNPLEV 602
            + ++++N+ YL+A++KE LR++PP P+   R   ED ++ GY +  GT++I+N W + RD   W +   EFRPER     +  D   ++F+YIPF  GRR CPG+  G  +  +TLA +++ FD     G P G     +  G G+ + +  PL V
Sbjct:  340 SGKEVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHF--DSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDG-PSGYDKPDLVEGAGIDVCRKFPLVV 492          
The following BLAST results are available for this feature:
BLAST of DN617618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 448
Match NameE-valueIdentityDescription
THAS_PIG3.416e-2140.67Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=... [more]
CP4V2_HUMAN3.416e-2137.27Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
C71AO_ARATH3.416e-2136.15Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH3.416e-2135.53Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
CP4V2_PONAB4.461e-2137.27Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2... [more]
C79A2_ARATH4.461e-2134.16Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C71AQ_ARATH5.826e-2137.10Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
CP3AT_PIG7.609e-2138.46Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C71C4_MAIZE9.938e-2136.80Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AG_ARATH9.938e-2135.90Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617618 ID=DN617618; Name=DN617618; organism=Citrus sinensis; type=EST; length=641bp
TTTTTTTTTTTTTTTTCACTTAGAAAAATGTTATTGGCGCATTAGTCGCC
TTCACATTAGTTCTTTCTGATAATACACGTAAATGATCGTTTAAAATGAT
GAAATCTTCAAATGCATCGAAAAAGATCCTCAGCGAGGCGAGGTTTTATG
ATAACTTCAAGAGGGTTCGATTTGGGCAGGGCAAGGCCCAAACCAATCTG
CATACCAACAGGTGTGCCCCCCACGGTTGCCAAATCAAACCCCTGAAGAA
TCCGAGCAAGCGTTAATTGAACAATCTGTAAGCCAGATGTCATTCCAGGG
CACGATCTTCTTCCAAAGCTGAACGGAATATACTCAAAATGTTGAGTGTT
GACATCAACATCAGCATGAGTTGTCAGAAACCTTTCTGGTCTGAACTCGC
ACGGATTTTCCCACATCCGAGGGTCTCTGTGCAGCTTCCATATGTTCACG
ATCAAACGCGTGCCTTTCGGGACATGATAGCCACCAATTTCACAATCTTC
CATGGCTTCCCGAATTCCTGTTACAGGACCAGGTGGGTAAATCCGTAGAG
TTTCTTTGACAATGGCTCGAAGGTATTTTAGGTTCTTCATATCCTGACTC
GTTTACCCATCTGTCTCTTCCAACATGGACGTCCAACTCTT
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