DN617618

Overview
NameDN617618
Unique NameDN617618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.175e-19
Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = -1
Query:  138 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAM--EDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPR 602
            T   +  ++YL  +V ETLR+YP   + G  E +  +D +I G  +PKGT +++  + LHRDP+ W  P EFRPERF   + D   N   + Y PF  G R+C GM   L  ++L L R++Q F       T V +++G    L    P+ + +  R
Sbjct:  344 TYDTLVKMEYLDMVVNETLRLYP---IAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHWTEPDEFRPERFSKKNKD---NINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSFKLCKETQVPLKLGKQGLLQPEKPIVLKVVSR 494          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = -1
Query:  159 MKNLKYLRAIVKETLRIYPPGPVTGIREAM--EDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPL 590
            M  ++YL  +V ETLR+YP   VT   E M  +D EI G   PKGT +++  + LHRD + W  P EFRPERF   + +   N   + Y+PF  G R+C GM   L  ++L L R+LQ F       T + +++G    L  + P+
Sbjct:  350 MMEMEYLDMVVNETLRLYP---VTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERFSKKNKE---NIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSFYPCKETQIPLRLGSEALLQPAKPI 489          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = -1
Query:  138 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAM--EDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPR 602
            T   +  ++YL  ++ ETLR+YP   + G  E +  +D EI G  +PKGT ++V  + LHRD  +W  P EFRPERF   + D   +   + Y+PF  G R+C GM   +  ++L L R+LQ F       T + +++     +    P+ + ++PR
Sbjct:  346 TYDALVQMEYLDMVLNETLRLYP---IAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLWPEPEEFRPERFSRKNKD---SINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFKPCKETQIPLKLNAQGIIQPEKPIVLKVEPR 496          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 9.164e-19
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = -1
Query:  111 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHA-DVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSN-----PLEVIIKPRLAEDLFRCI 593
            D+  L Y++A ++E  R++P  P      A+ D  I GY VPKG+ +I++   L R+PR+W+ P  F P+R L T A DV +      +I FS GRR C   + G  +  +   R+LQGF        P G++  + L+  KS+     PL +  +PRL   L+  I
Sbjct:  395 DIPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAASDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGF----TWSKPAGVE-AVDLSESKSDTFMATPLVLHAEPRLPAHLYPSI 556          

HSP 2 Score: 20.7866 bits (42), Expect = 9.164e-19
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = -3
Query:  595 ELDVHVGRDRWVNES 639
            ELD  VGR+R V ES
Sbjct:  380 ELDRVVGRERLVQES 394          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.171e-19
Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = -1
Query:  120 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHA---DVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLAT-VGGTPVGMQIGLGLALPKSNPLEVIIKPRLAEDLF 593
            D+ NL YL+A  +ET RI+P         A +D  +GGY +PKG+ + V    L R+P++W++P  ++PER L       +V +      ++ FS GRR C G+  G  ++ + LAR LQGF+        P+ ++     +L  + PL + ++PRLA +L+
Sbjct:  373 DIPNLNYLKACCRETFRIHPSAHYVPSHLARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYKPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCIGVKVGTIMMVMLLARFLQGFNWKLHQDFGPLSLEED-DASLLMAKPLHLSVEPRLAPNLY 533          

HSP 2 Score: 22.7126 bits (47), Expect = 9.171e-19
Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = -3
Query:  595 ELDVHVGRDRWVNES 639
            ELD  VGRDR V ES
Sbjct:  358 ELDEVVGRDRLVQES 372          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = -1
Query:  159 TSQDMKNLKYLRAIVKETLRIYPPGPVTGIREAM--EDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQIGLGLALPKSNPL 602
            T   +  ++YL  +V ETLR+YP   + G  E +   D EI G  +PKGT +++  + LH+DP+ W  P EFRPERF   + D   +   + Y+PF  G R+C GM   L  +++ L R+LQ F +     T + +++     L   NPL
Sbjct:  346 TYDTLLQMEYLDMVVNETLRLYP---IAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQD---SINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEIPLKLSKQGLLQPENPL 489          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 41/119 (34.45%), Postives = 71/119 (59.66%), Query Frame = -1
Query:  237 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGF 593
            D+  L Y++AI++E  R++P         A+ D  + GYH+PKG++++++ + L R+P++W +P  F+PER L   ++V +      +I FS G+R C     G  +  + LAR+LQGF
Sbjct:  380 DIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGF 498          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = -1
Query:  135 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDV-NTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFD-LATVGGTPVGMQIGLGLALPKSNPLEVIIKPRL 593
            D++ + YL A+VKE LR +PP   T      E  ++ GY +P  T +   +  +  DP +W +P +F P+RFL+   D D+   +  + +PF  GRR CPG+      V L LAR++Q F+  A  G   V     L   +   NPL   +K R+
Sbjct:  345 DIEKMPYLNAVVKELLRKHPPTYFTLTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRAKVKLRI 499          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.193e-18
Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = -1
Query:  120 DMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHA---DVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGG-TPVGMQIGLGLALPKSNPLEVIIKPRLAEDLF 593
            D++NL YL+A  +ET RI+P         A +D  +GGY +PKG+ + V    L R+P++W++P  + PER L       +V +      ++ FS GRR C G+  G  ++ + LAR LQGF+        P+ ++     +L  + PL + ++PRLA +L+
Sbjct:  372 DIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEED-DASLLMAKPLLLSVEPRLASNLY 532          

HSP 2 Score: 21.557 bits (44), Expect = 1.193e-18
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = -3
Query:  595 ELDVHVGRDRWVNES 639
            ELD  VG+DR V ES
Sbjct:  357 ELDEVVGKDRLVQES 371          
BLAST of DN617618 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 51/152 (33.55%), Postives = 85/152 (55.92%), Query Frame = -1
Query:  138 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVGMQI-GLGLALPKSNPLEVIIKPR 590
            +  + YL  ++ E+LR+YP  P    R A +  EI G  +PK   ++V  W LHRDP +W +P EF+PERF   + +   +   + Y+PF  G R+C GM   L +++L +  ILQ F  +    T + +++   GL +PK  P+++ ++ R
Sbjct:  355 LMQMDYLDCVLNESLRLYPIAPRLE-RVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIWSDPEEFKPERFSKENKE---SIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSVCDETEIPLEMDNQGLLMPK-RPIKLRLEAR 501          
The following BLAST results are available for this feature:
BLAST of DN617618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 448
Match NameE-valueIdentityDescription
CP3A6_RABIT4.175e-1935.03Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP3AE_CAVPO5.453e-1937.67Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
CP3AC_CANFA5.453e-1933.12Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
C79A1_SORBI9.164e-1934.13Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C79F1_ARATH9.171e-1933.33Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
CP3AD_MOUSE9.302e-1935.33Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
C79B2_ARATH9.302e-1934.45Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C77A1_SOLME9.302e-1933.55Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C79F2_ARATH1.193e-1833.33Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
CP3AR_ONCMY1.215e-1833.55Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617618 ID=DN617618; Name=DN617618; organism=Citrus sinensis; type=EST; length=641bp
TTTTTTTTTTTTTTTTCACTTAGAAAAATGTTATTGGCGCATTAGTCGCC
TTCACATTAGTTCTTTCTGATAATACACGTAAATGATCGTTTAAAATGAT
GAAATCTTCAAATGCATCGAAAAAGATCCTCAGCGAGGCGAGGTTTTATG
ATAACTTCAAGAGGGTTCGATTTGGGCAGGGCAAGGCCCAAACCAATCTG
CATACCAACAGGTGTGCCCCCCACGGTTGCCAAATCAAACCCCTGAAGAA
TCCGAGCAAGCGTTAATTGAACAATCTGTAAGCCAGATGTCATTCCAGGG
CACGATCTTCTTCCAAAGCTGAACGGAATATACTCAAAATGTTGAGTGTT
GACATCAACATCAGCATGAGTTGTCAGAAACCTTTCTGGTCTGAACTCGC
ACGGATTTTCCCACATCCGAGGGTCTCTGTGCAGCTTCCATATGTTCACG
ATCAAACGCGTGCCTTTCGGGACATGATAGCCACCAATTTCACAATCTTC
CATGGCTTCCCGAATTCCTGTTACAGGACCAGGTGGGTAAATCCGTAGAG
TTTCTTTGACAATGGCTCGAAGGTATTTTAGGTTCTTCATATCCTGACTC
GTTTACCCATCTGTCTCTTCCAACATGGACGTCCAACTCTT
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