DN617611

Overview
NameDN617611
Unique NameDN617611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX2_HUMAN (Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = -3
Query:  327 LHLVHKHL---GDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLK 614
            LH +H  L   GDF+    ++  Q  +A      L   +R +AI L DA+++TD  L S LG YDGNVY +L++ A K P N    P  Y EYIRPLL+
Sbjct:  578 LHAIHGILTNSGDFLHDAFLSGAQVDMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNTQENP-AYEEYIRPLLQ 675          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX2_RABIT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolagus cuniculus GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.119e-13
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = -3
Query:  312 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLKQQLRN 614
            LH +  + GDF+  G ++  Q  +A      L   +R +AI L DA+++TD  L S LG YDGNVY +L+E A + P N    P  Y +YI+PLL+    N
Sbjct:  581 LHGILTNSGDFLHDGFLSGAQVDMARTAYMDLLPLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFEWAQRSPTNTQENP-AYKKYIQPLLQSWRSN 680          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_DROME (Probable peroxisomal acyl-coenzyme A oxidase 1 OS=Drosophila melanogaster GN=CG5009 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.073e-13
Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = -3
Query:  318 LGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLKQQL 593
            +GDF+    +T +  +    +L +   + RPNA++LVD+++  D  L S LG YDGNVY  ++E   K+PLN   V   +H+Y++P +K  L
Sbjct:  578 IGDFLRFIDLTDQDVTKLEVRLENCLKRFRPNAVSLVDSFDLHDRVLDSALGAYDGNVYEHIFESTKKNPLNKEPVNGAFHKYLKPFMKAHL 669          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX2_MOUSE (Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus musculus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  327 GDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLK 590
            GDF+  G ++  Q  +A      L   +R +AI L DA++++DH L S LG YDG+VY +L+E A K P N    P  Y +YIRPL++
Sbjct:  589 GDFLHDGFLSGAQVDMARTAFLDLLPLIRKDAILLTDAFDFSDHCLNSALGCYDGHVYQRLFEWAQKSPANTQENP-AYKKYIRPLMQ 675          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_DICDI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum GN=acox1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = -3
Query:  318 LVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLKQQL 608
            +++ +L DF+    +   Q     + L + Y  +RPN + LVD+++  +  LGS LG Y+G+VY  LY+ A   P N + +P G++E I+PL+  +L
Sbjct:  604 IINSNLVDFLQDQYVELSQIDFLKKSLINFYKLLRPNLVPLVDSFDLCNTTLGSALGSYNGDVYSTLYKWASTQPFNKNSLPLGFNETIKPLINSKL 700          
The following BLAST results are available for this feature:
BLAST of DN617611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACOX2_HUMAN1.828e-1342.42Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapi... [more]
ACOX2_RABIT3.119e-1339.60Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolag... [more]
ACOX1_DROME4.073e-1336.96Probable peroxisomal acyl-coenzyme A oxidase 1 OS=... [more]
ACOX2_MOUSE6.948e-1342.05Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus muscu... [more]
ACOX1_DICDI1.003e-1134.02Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyoste... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H04_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617611 ID=DN617611; Name=DN617611; organism=Citrus sinensis; type=EST; length=616bp
CTTCATCAATCGAAGAATAAAAATATTAGCGAAAAATAGTGCACATAAAT
AAGCAAATCGTATTACAACCATTTTATCCATCTACAAATGAAGAATCTTC
TTCCATAACGTGAAGTCTAACAAATAAACCCCGAATTCGTCAACGATCTG
ATGGATCAACTTGATAGTATCCACAGACCCATATTATTCTATTGTGGGTG
GTCAATATGTTAATTTTATTGGCAAAAATTATTGATAGGATAAAAAGTGT
ATACGATTTGAATTACTTGGGTATACACCACACCCTTTCATCATATTCTT
TAGAGTCTTGCATTTCGAAGCTGTTGTTTCAGAAGAGGCCTGATGTATTC
ATGGTAGCCATCAGGCACAACTGAGTCATTTAGAGGATCCTTCCATGCTT
CCTCGTAGAGTTTCGGGTACACATTTCCATCATACCGTCCAAGGACCGAG
CCAAGATAGTGATCGGTGTAATTATATGCATCGACGAGTGCAATAGCATT
AGGTCGGACCTGGGAATATAAAGATCTTAGCTGTTCATTAGCTAGGGAAG
CTTGCTTGGCAGTAATGCAGCCAGTGGAAACGAAATCACCTAGATGTTTG
TGAACAAGATGCAAAG
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