EY662353

Overview
NameEY662353
Unique NameEY662353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.619e-11
Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            E   +SF+RA+ AEF  T+ +++  +   + + +   AN             IA AFG ++  +V     +SG HINPAVTF   +  ++SL RA+ Y+ AQ LGA+ G  ++
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASLKWAAGP-AN----------VLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVL 104          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.619e-11
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            EL   SF+RAI+AEF+ +LL+      T++G  +                   A AFG     LV     +SGGHINPA+T    LA ++SL RA+ Y++AQ LGA+ G G++
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASL-----RWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVL 104          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.033e-11
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +A +AEFIATLLF++  V + I +   T+               IA A    +FV V   A  SGGH+NPAVTFGL +   ++++  + Y VAQ LGA   C L++
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAFGQLTNGG----ALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR 120          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +A +AEFI+TL+F++    + + +   T                +A AF   +FV V   A ISGGH+NPAVTFG F+   ++L R ++Y +AQ LG+   C L++
Sbjct:   21 KAALAEFISTLIFVFAGQGSGMAFSKLTGGG--ATTPAGLIAAAVAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLR 122          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 2
Query:  191 SFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            +F +A+ +EF+ATLLF++  + + + +     +              IA AFG  I  LV     ISG HINPAVT    +   VS +RA+ Y+ AQ LGA+ G  L+
Sbjct:    3 AFSKAVFSEFLATLLFVFFGLGSALNWPQALPSG-----------LQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALL 99          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP2_ELEMA (Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 2
Query:  191 SFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            +F RA+ +EF+ATLLF++  + + + +     +              IA AFG  I  LV     ISG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFSEFLATLLFVFFGLGSALNWPQALPS-----------VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAALL 99          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP2_CANFA (Aquaporin-2 (Fragment) OS=Canis familiaris GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 2
Query:  191 SFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            +F RA+ AEF+ATLLF++  + + + +     +              IA AFG  I  LV     +SG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFAEFLATLLFVFFGLGSALNWPQALPS-----------VLQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of EY662353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
MIP_RANPI4.619e-1133.63Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_CHICK4.619e-1138.05Lens fiber major intrinsic protein OS=Gallus gallu... [more]
TIP22_MAIZE6.033e-1138.68Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP11_ORYSJ7.879e-1135.85Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQP2_ORYAF7.879e-1136.11Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]
AQP2_ELEMA7.879e-1137.04Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 ... [more]
AQP2_CANFA7.879e-1137.04Aquaporin-2 (Fragment) OS=Canis familiaris GN=AQP2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662353 ID=EY662353; Name=EY662353; organism=Citrus sinensis; type=EST; length=589bp
TTCCTCGACCCACGCGTCCGCTCTCTTATCTCCCATTGGGAATTTTTTTT
TTTTTTAAATTCTCAGTGAAGACCAATCCGTAACAATGGCCAAGGACATT
GAGGTTGGTGGGCAAGGCGAGTTCCATGCTAAGGATTACCATGACCCTCC
GCCAGCTCCATTGATCGATGCCGAGGAGCTCACTAAATGGTCATTTTACA
GGGCTATTATAGCTGAGTTCATCGCCACGCTCTTGTTTTTGTACATTACT
GTGCTGACAGTGATTGGTTACAAGAGCCAGACTGACGCCAACCACGGCGG
TGATGGATGTGGTGGTGTTGGCATTCTGGGCATCGCTTGGGCCTTTGGTG
GCATGATCTTTGTTCTTGTTTACTGCACTGCTGGTATCTCTGGTGGACAC
ATTAACCCGGCGGTGACATTTGGGCTGTTCTTGGCGCGGAAGGTGTCACT
GGTGCGAGCCGTAATGTACATGGTGGCTCAGTGTTTGGGAGCCATATGTG
GCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTACTACACGAGATACGGC
GGTGGAGCAAATGAGCTCGCTGATGGGTACAGCACTGGG
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