EY662353

Overview
NameEY662353
Unique NameEY662353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.265e-57
Identity = 114/169 (67.46%), Postives = 127/169 (75.15%), Query Frame = 2
Query:   86 MAKD-IEVGGQGEFHAKDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            M+K+ I   GQ   H KDY DPPPAP  D  EL  WSF+RA IAEFIATLLFLYITV TVIGYK +TD               IAW+FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA++YM+AQC GAICG GLVKAF K  Y ++GGGAN +A GY+ G
Sbjct:    1 MSKEVISEEGQVHQHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKG 163          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 3.991e-55
Identity = 108/153 (70.59%), Postives = 117/153 (76.47%), Query Frame = 2
Query:  131 KDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            KDY DPPPAPL D  EL  WSFYRA+IAEFIATLLFLYITV TVIGYK Q+ A+             IAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS++RAVMY+VAQCLG I G G+VK   K  Y   GGGAN +A GYSTG
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLG----IAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTG 163          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.044e-52
Identity = 103/162 (63.58%), Postives = 116/162 (71.60%), Query Frame = 2
Query:  104 VGGQGEFHAKDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            +G   +   KDY +PPPAPL +  EL+ WSFYRA IAEFIAT LFLYITVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG G+VK FQ + Y   GGGAN +A GY+ G
Sbjct:   21 IGTSAQSTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKG 176          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.677e-51
Identity = 99/153 (64.71%), Postives = 113/153 (73.86%), Query Frame = 2
Query:  131 KDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            KDY +PPPAPL +AEELT WSFYRA IAEF+AT LFLYI++LTV+G    +                IAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G+VK FQ+  Y   GGGAN +  GY+ G
Sbjct:   31 KDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKG 177          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 2.677e-51
Identity = 101/153 (66.01%), Postives = 112/153 (73.20%), Query Frame = 2
Query:  131 KDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLYITVLTV+G  + T                IAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G+VK FQK  Y   GGGAN +A GY+ G
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKG 177          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.788e-51
Identity = 99/164 (60.37%), Postives = 114/164 (69.51%), Query Frame = 2
Query:   98 IEVGGQGEFHAKDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            I    QG    KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLYIT+LTV+G    T                IAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+CG G+VK FQ+  Y   GGGAN +A GY+ G
Sbjct:   21 IGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKG 178          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.788e-51
Identity = 100/164 (60.98%), Postives = 114/164 (69.51%), Query Frame = 2
Query:   98 IEVGGQGEFHAKDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            I    QG    KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLYIT+LTV+G    +                IAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK FQ+  Y   GGGAN +A GY+ G
Sbjct:   21 IGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKG 178          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.017e-50
Identity = 100/162 (61.73%), Postives = 114/162 (70.37%), Query Frame = 2
Query:  104 VGGQGEFHAKDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            +G   +  +KDY +PPPAP  +  EL  WSFYRA IAEFIAT LFLY+TVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK FQ   Y   GGGAN +A GY+ G
Sbjct:   21 IGTAAQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKG 176          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.017e-50
Identity = 101/153 (66.01%), Postives = 112/153 (73.20%), Query Frame = 2
Query:  131 KDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            KDY +PPPAP  +  EL+ WSFYRA IAEFIAT LFLYITVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK FQ + Y   GGGAN +A GY+ G
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKG 175          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.017e-50
Identity = 101/153 (66.01%), Postives = 111/153 (72.55%), Query Frame = 2
Query:  131 KDYHDPPPAPLIDAEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            KDY +PPPAPL +  EL  WSF+RA IAEFIAT LFLYITVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK FQ   Y   GGGAN +A GY+ G
Sbjct:   29 KDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKG 175          
The following BLAST results are available for this feature:
BLAST of EY662353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
PIP1_ATRCA3.265e-5767.46Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP26_ORYSJ3.991e-5570.59Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP14_ARATH7.044e-5263.58Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_MAIZE2.677e-5164.71Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP12_ORYSJ2.677e-5166.01Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE7.788e-5160.37Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP11_ORYSJ7.788e-5160.98Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP15_ARATH1.017e-5061.73Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH1.017e-5066.01Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP12_ARATH1.017e-5066.01Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662353 ID=EY662353; Name=EY662353; organism=Citrus sinensis; type=EST; length=589bp
TTCCTCGACCCACGCGTCCGCTCTCTTATCTCCCATTGGGAATTTTTTTT
TTTTTTAAATTCTCAGTGAAGACCAATCCGTAACAATGGCCAAGGACATT
GAGGTTGGTGGGCAAGGCGAGTTCCATGCTAAGGATTACCATGACCCTCC
GCCAGCTCCATTGATCGATGCCGAGGAGCTCACTAAATGGTCATTTTACA
GGGCTATTATAGCTGAGTTCATCGCCACGCTCTTGTTTTTGTACATTACT
GTGCTGACAGTGATTGGTTACAAGAGCCAGACTGACGCCAACCACGGCGG
TGATGGATGTGGTGGTGTTGGCATTCTGGGCATCGCTTGGGCCTTTGGTG
GCATGATCTTTGTTCTTGTTTACTGCACTGCTGGTATCTCTGGTGGACAC
ATTAACCCGGCGGTGACATTTGGGCTGTTCTTGGCGCGGAAGGTGTCACT
GGTGCGAGCCGTAATGTACATGGTGGCTCAGTGTTTGGGAGCCATATGTG
GCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTACTACACGAGATACGGC
GGTGGAGCAAATGAGCTCGCTGATGGGTACAGCACTGGG
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