EY662353

Overview
NameEY662353
Unique NameEY662353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.779e-13
Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  173 EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +E T+    +A +AEFI+TL+F+     + + +   T+  +            +A AFG  +FV V   A ISGGH+NPAVTFG F+   ++L+R ++Y +AQ LG++  C ++K
Sbjct:   12 DEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTE--NGATTPSGLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK 122          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.446e-13
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +A +AEFI+TL+F++  V + I Y   T                +A   G  +FV V   A ISGGH+NPAVTFGL L  +++++  V Y +AQ LGAI G  LV+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGG----APLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQ 121          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.418e-13
Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            EL+     +A +AEFI+ L+F++    + + +   TD                A A    +FV V   A ISGGH+NPAVTFG F+   +SLV+AV+Y VAQ LG++  C L+K
Sbjct:   13 ELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALA----LFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLK 122          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.418e-13
Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            EL+     +A +AEFI+TL+F++    + + +   TD                A A    +FV V   A ISGGH+NPAVTFG F+   +SL++A++Y VAQ LG++  C L+K
Sbjct:   13 ELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALA----LFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLK 122          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 8.418e-13
Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 2
Query:  191 SFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            + +R ++AEF+ T   + I + +  G+   +                IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI G  ++KA   S     G G   +A G STG
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPT-----------LTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTG 141          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.418e-13
Identity = 40/114 (35.09%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  173 EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            +E+   +F +A+ AEF+ATL+F++  + + + + S                  IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RA  Y+ AQ +GAI G G++
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL 105          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.099e-12
Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +A +AEFIATLLF++  V + I Y   T                IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  ++Y VAQ LGA   C L++
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGG----ALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ 120          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.436e-12
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 2
Query:  173 EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG 589
            +E+   +F +A+ AEF+ATL+F++  + + + + S   +              I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL+RAV Y+VAQ +GAI G  ++      Y  R     N L +  + G
Sbjct:    3 KEVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPSAMPS-----------VLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAG 129          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.875e-12
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +A +AEFIATLLF++  V + I Y   T                +A A    +FV V   A +SGGH+NPAVT GL +   ++++  + Y +AQCLG+   C L+K
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTS----DAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK 120          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.449e-12
Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +A +AEFIATLLF++  V + I Y   T+               IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y +AQ LGA   C L+K
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGG----ALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK 120          
The following BLAST results are available for this feature:
BLAST of EY662353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
TIP11_ARATH3.779e-1335.65Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP22_ORYSJ6.446e-1340.57Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP12_ORYSJ8.418e-1338.60Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE8.418e-1337.72Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQP_ANOGA8.418e-1332.33Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_HUMAN8.418e-1335.09Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP23_MAIZE1.099e-1240.57Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQP5_SHEEP1.436e-1230.94Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP_ANTMA1.875e-1237.74Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP21_ORYSJ2.449e-1240.57Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662353 ID=EY662353; Name=EY662353; organism=Citrus sinensis; type=EST; length=589bp
TTCCTCGACCCACGCGTCCGCTCTCTTATCTCCCATTGGGAATTTTTTTT
TTTTTTAAATTCTCAGTGAAGACCAATCCGTAACAATGGCCAAGGACATT
GAGGTTGGTGGGCAAGGCGAGTTCCATGCTAAGGATTACCATGACCCTCC
GCCAGCTCCATTGATCGATGCCGAGGAGCTCACTAAATGGTCATTTTACA
GGGCTATTATAGCTGAGTTCATCGCCACGCTCTTGTTTTTGTACATTACT
GTGCTGACAGTGATTGGTTACAAGAGCCAGACTGACGCCAACCACGGCGG
TGATGGATGTGGTGGTGTTGGCATTCTGGGCATCGCTTGGGCCTTTGGTG
GCATGATCTTTGTTCTTGTTTACTGCACTGCTGGTATCTCTGGTGGACAC
ATTAACCCGGCGGTGACATTTGGGCTGTTCTTGGCGCGGAAGGTGTCACT
GGTGCGAGCCGTAATGTACATGGTGGCTCAGTGTTTGGGAGCCATATGTG
GCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTACTACACGAGATACGGC
GGTGGAGCAAATGAGCTCGCTGATGGGTACAGCACTGGG
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