EY662353

Overview
NameEY662353
Unique NameEY662353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.307e-12
Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            EL   SF+RAI AEF ATL +++  +   + +                    +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWTP-----------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL 104          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.216e-11
Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 2
Query:  170 AEELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +E+ T     RA I+EFIAT +F++    +V+        +             +A A G  + V V     +SGGH+NPAVTFG  +  +VSLVRAV+Y  AQ LGA+    L++
Sbjct:   18 SEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLR 131          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.216e-11
Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            EL   +F RA+ AEF+ATLLF++  + + + +     +              IA AFG  I  LV     ISG HINPAVT    +   VS++RA  Y+ AQ LGA+ G  L+
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPS-----------VLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALL 104          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.588e-11
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            EL   +F RA++AEF+ATLLF++  + + + + S   +              IA AFG  I  LV     +SG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  ++
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----------VLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 104          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.073e-11
Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 2
Query:  170 AEELTKWSFYRAIIAEFIATLLFLYITVLTVIG----YKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            +E+ T     RA I+EFIAT +F++    +V+     Y   + A              +A A    + V V     ISGGH+NPAVTFG  +  +VSLVRAV+Y VAQ LGA+    L++
Sbjct:   16 SEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAG---------GLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLR 126          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.073e-11
Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            EL   SF+RAI AEF ATL +++  +   + +                    +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAP-----------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL 104          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: AQP2_RABIT (Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.073e-11
Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 2
Query:  191 SFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            +F RA+ AEF+ATLLF++  + + + + S   +              IA AFG  I  LV     +SG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFAEFLATLLFVFFGLGSALNWPSALPST-----------LQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.708e-11
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 2
Query:  170 AEELTKWSFYRAIIAEFIATLLFLYITVLTVIGY-KSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            A+E T     RA +AEF++T +F++    +++   K   D               +A A    +F  V     +SGGH+NPAVTF   +  ++S++RA+ Y VAQ +GAI  C L++
Sbjct:   14 ADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLR 130          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.708e-11
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 2
Query:  200 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK 517
            RA  AEF + ++F++    + + Y   T                 A+A    +FV V   A +SGGH+NPAVTFG F+   ++L+RA++Y +AQ LGA+  C L+K
Sbjct:   21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFA----LFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLK 122          
BLAST of EY662353 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.708e-11
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  176 ELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 514
            EL   SF+RAI AEF ATL +++  + + + +                    +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  Y+ AQ LGA+ G  ++
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAP-----------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL 102          
The following BLAST results are available for this feature:
BLAST of EY662353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
MIP_CANFA9.307e-1236.28Lens fiber major intrinsic protein OS=Canis famili... [more]
TIP32_MAIZE1.216e-1136.21Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQP2_HUMAN1.216e-1138.05Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP2_MOUSE1.588e-1137.17Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP31_MAIZE2.073e-1137.50Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
MIP_CAVPO2.073e-1136.28Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQP2_RABIT2.073e-1137.96Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN... [more]
TIP32_ARATH2.708e-1132.48Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP13_ARATH2.708e-1135.85Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
MIP_RAT2.708e-1135.40Lens fiber major intrinsic protein (Fragment) OS=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662353 ID=EY662353; Name=EY662353; organism=Citrus sinensis; type=EST; length=589bp
TTCCTCGACCCACGCGTCCGCTCTCTTATCTCCCATTGGGAATTTTTTTT
TTTTTTAAATTCTCAGTGAAGACCAATCCGTAACAATGGCCAAGGACATT
GAGGTTGGTGGGCAAGGCGAGTTCCATGCTAAGGATTACCATGACCCTCC
GCCAGCTCCATTGATCGATGCCGAGGAGCTCACTAAATGGTCATTTTACA
GGGCTATTATAGCTGAGTTCATCGCCACGCTCTTGTTTTTGTACATTACT
GTGCTGACAGTGATTGGTTACAAGAGCCAGACTGACGCCAACCACGGCGG
TGATGGATGTGGTGGTGTTGGCATTCTGGGCATCGCTTGGGCCTTTGGTG
GCATGATCTTTGTTCTTGTTTACTGCACTGCTGGTATCTCTGGTGGACAC
ATTAACCCGGCGGTGACATTTGGGCTGTTCTTGGCGCGGAAGGTGTCACT
GGTGCGAGCCGTAATGTACATGGTGGCTCAGTGTTTGGGAGCCATATGTG
GCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTACTACACGAGATACGGC
GGTGGAGCAAATGAGCTCGCTGATGGGTACAGCACTGGG
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