DN617500

Overview
NameDN617500
Unique NameDN617500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 48/151 (31.79%), Postives = 84/151 (55.63%), Query Frame = -1
Query:  156 SEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 599
            +E   +DW   F +  LP           L   ++  ++ ++ +L NLA ++L  + + L ++   +K  F   +G     +++ YPPCP+P L+ GL  H+DAGG+ +L Q +++ GLQ+ KDG W+ +  +  A ++N+GD LEVI  G
Sbjct:   79 AEVNDMDWESTFFLRHLPE--SNISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNG 227          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18
Identity = 55/179 (30.73%), Postives = 88/179 (49.16%), Query Frame = -1
Query:  156 KKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTL-----------ESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 659
            K+K  ++PG+  G+  +F      KL W +  +      +         +  +F DTL           + Y   + +L+LKI+  +  +L ++ +  +  FEE   IMR+N+YPPC  P L +G  PH D   LTIL Q + ++GLQ+  D  W  I+  P AF++NIGD    +  G
Sbjct:  121 KQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQ----FSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQ-DHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNG 294          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18
Identity = 48/151 (31.79%), Postives = 84/151 (55.63%), Query Frame = -1
Query:  156 SEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIM---RMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 599
            SE   +DW   F +  LP  +      P L   +R  ++ ++ ++  L+ ++L  + + L ++   +K +F    +     +++ YPPCP P LV GL  H+DAGG+ +L Q +++ GLQ+ KDG WV +  +  + ++N+GD LEVI  G
Sbjct:   79 SEVNDVDWESTFYLKHLP--VSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNG 227          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.308e-18
Identity = 48/150 (32.00%), Postives = 84/150 (56.00%), Query Frame = -1
Query:  156 EEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFE--EGVQI-MRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 596
            E + +DW   F +  LP      +  P +   +R  ++ +   L NLA  +L  + + L ++   +K +F   +G     +++ YP CP+P+++ GL  H+DAGG+ +L Q +++ GLQ+ KDG W+ +  L  + +IN+GD LEVI  G
Sbjct:   83 EVEDVDWESTFYLRHLPQ--SNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNG 230          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17
Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGD 662
            +K ++    G   GF  +  +  E   DW ++   ++ P   R    +P  P  +    E YS  L +LA K+L  +++A+ ++   + +   +  Q + +NYYP CPQP L +GL  H+D G +T+LLQ +++ GLQ  +D    W+ ++ +  AF++N+GD
Sbjct:   99 DKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDNGKTWITVQPVEGAFVVNLGD 260          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.851e-17
Identity = 48/122 (39.34%), Postives = 75/122 (61.48%), Query Frame = -1
Query:  165 PHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVI 530
            P  FP +    RD L  YS  +RNL L +   +++AL + PN ++++      I+  +YYP CPQP+L  G + HSD+G LTIL+Q +++ GLQI  +  W+ +  +P A +INI D L++I
Sbjct:  197 PQEFPDV---CRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ-DQIGGLQILLENQWIDVPFIPGALVINIADLLQLI 314          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.851e-17
Identity = 49/148 (33.11%), Postives = 81/148 (54.73%), Query Frame = -1
Query:  156 LDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIM-----RMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 584
            LDW   F +  LPT        P L      T++ ++  L  LA ++L  + + L ++   +K +F  G   +     +++ YPPCP+P+L+ GL  H+DAGG+ +L Q + + GLQ+ KD  W+ +  +  + ++NIGD LEVI  G
Sbjct:   80 LDWESTFFLRHLPT--SNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNG 225          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.851e-17
Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = -1
Query:  165 WADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVI 578
            W D    Y  P     P    + P    ++L  +S +++ L   +L  +++ L +D + +KD  +        NYYPPCPQP+L MG   H+D G +TILLQ ++M GLQ+     WV +   P + ++NIGD L+++
Sbjct:  150 WRDTIFCYMAPN----PPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ-DDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLL 282          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.157e-17
Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHL---FPKLPVH----FRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGD 662
            EK++  ++ G+  G+  +F      KL W +  +        R   +   F     H    F    + Y   + +L+LKI+  +  +L +  +  ++ FEE   IMR+NYYPPC +P L +G  PH D   LTIL Q + ++GLQ+  +  W  I+  P AF++NIGD
Sbjct:  122 EKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVENQWRSIRPNPKAFVVNIGD 288          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.157e-17
Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGD 662
            EK ++    G   GF  +  +  E   DW ++   ++ PT  R    +P  P  +    + YS +L  LA K+L  +++A+ ++   +     +  Q + +N+YP CP+P L +GL  H+D G +T+LLQ +++ GLQ  KD    W+ ++ +  AF++N+GD
Sbjct:  102 EKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPVEGAFVVNLGD 263          
The following BLAST results are available for this feature:
BLAST of DN617500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
ACCO1_CUCME4.870e-1831.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
GAOX2_ARATH6.361e-1830.73Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCO1_ARATH6.361e-1831.791-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO1_BRAJU8.308e-1832.001-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
FL3H_ARATH1.085e-1730.06Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
DV4H_CATRO1.851e-1739.34Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO_DENCR1.851e-1733.111-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCH3_SOLLC1.851e-1733.331-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GAOX1_ARATH3.157e-1731.55Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
FL3H_PETHY3.157e-1730.06Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617500 ID=DN617500; Name=DN617500; organism=Citrus sinensis; type=EST; length=662bp
TAAGGATTCAATAATTAAAATAAGTTTCAACAAACACCCTCTTGAAGAAA
TCATTAAAAGAGTTTGCATATTCGAAAAATCGAATCAAATTTGAAACCTT
AACTTTGATACCATATTGGATAAACCTCTTGGCCAAAAACTTATAGCAAG
TGACAGCCATAAACTATTACCTCCAAAGCATCACCAATGTTGATAATAAA
AGCATCAGGGAGGGCTTTAATAGGAACCCATAATCCATCTTTCTTTATTT
GAAGGCCATCCATCTCATTGATTTGGAGGAGGATGGTTAGACCTCCGGCA
TCAGAATGAGGAGTAAGGCCCATAACAAGCTTCGGCTGGGGACACGGAGG
ATAGTAATTCATCCTCATTATTTGCACTCCTTCTTCAAACAAATCTTTGA
TATCGTTGGGATCCATTTTTAGAGCTTTTGCCATTTGGTAAAGAATTTTC
AAGGCAAGATTTCTAAGTTCTGCTGAGTAAGATTCCAAGGTATCTCTGAA
ATGGACAGGCAACTTGGGAAATAGATGGGGCTTCCTCAAATAAGTTGGAA
GAGTGTACATAGCAAACATATCTGCCCAATCAAGCTTCTGCTCCTCAGAC
ACAACAAAAGCCTGCCCAAATCCCTGAATATCGCCTGGTTGCTGCCAATA
CTTCTTTTTCTC
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